Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6979 |
Symbol | |
ID | 6125888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 1089926 |
End bp | 1090813 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641647983 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001774575 |
Protein GI | 170735461 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.363123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAC ACGGCAAAGC AAATGCCCTG ATCTTTCATA CCACTGTCTC GAGATTTTCC AACCTGGTCA CCGACCTCGA CACGATCGCC GCGATCGGGT TCGACGGCAT CGAGCTGGGT GCGGACAAGC TGGAAGCGTA CCTCGCGTCG GGCTACGGCG CCGGGGACCT GAAAGCGCTG CTCGAAGACA TCCATGTCCC CGGAATGGGG TTCCTGACCG ATATCGAGCG GCAGGGTCGG CAAGCATCGG AGATGTACGC GCGTGCCGAC GCGTTGTTCG AACTGGCAAC GCTGTCCGGC GCGCAAGGCA TACAGGTACT GACCGGGCCG GTCGACGTTC GATCGGTCGT CGAATGGACG CAAACCGGGA GGACGGACCG TTACGCCGGC GTACTCGGCC TGCCGCACGC GCGGCAGATC GCGGTCACCG CGAAAAATCT CGCTCGTCTG GCCGACATGG CCGCCGAGCG CGGCCTGGTG CTGTACCTGG AAGCGCTGTC GTGGGCGCCT GTCAGCGGCA TCGACAAATC GATCCAGCTG ATCGATGCGG CCGGTCGGGA CAACGTGAAA ATCGTCATCG ACTACTGGCA CTGCCACACG TCCGGCGTGA CACCCGACGA CATCGCGAAG CTGGACGCTC GCCTCATTCA TGGCGTCCAT GTGTGTGATT CGCTCCCTTT CCCCGGTGGG ATTCCGGACG AACAGGTGCT CCGCGACGTA CCGACCGGAG AAGGTGTCAT CGACCTGCAG CAATGGACCG ATGCGGTCAA GGCAACCGGC TATCGGGGAT GGTGGAGTTG CGAGTTGTTC TGCAGAAAGC AGCAGCAACA GAACGCCGCA ACCGTTGCCG CACAGCTCAA GCGCCTGCTG GCGCGCCTCG TCGCGTAA
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Protein sequence | MAAHGKANAL IFHTTVSRFS NLVTDLDTIA AIGFDGIELG ADKLEAYLAS GYGAGDLKAL LEDIHVPGMG FLTDIERQGR QASEMYARAD ALFELATLSG AQGIQVLTGP VDVRSVVEWT QTGRTDRYAG VLGLPHARQI AVTAKNLARL ADMAAERGLV LYLEALSWAP VSGIDKSIQL IDAAGRDNVK IVIDYWHCHT SGVTPDDIAK LDARLIHGVH VCDSLPFPGG IPDEQVLRDV PTGEGVIDLQ QWTDAVKATG YRGWWSCELF CRKQQQQNAA TVAAQLKRLL ARLVA
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