Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6793 |
Symbol | |
ID | 6125708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 892161 |
End bp | 894968 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641647803 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_001774395 |
Protein GI | 170735281 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.400617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACC GTATCAGATT GCCACGCCGG CTAGTTTTGA TATCGATTTT TGTTCTGCAA CTGCTTACGC TCGGAGCCAG TTGCTGGATT CTGTCGCGTA CCTGGGAAAA TGTGGAATTT ATGTCGAATG TGACGATTAC CGAGGTTGAC GCGATCATGC AAACGACCGA GCACCTGTCA GACGCACGCA TTACGCTTTC ACGAGCGGCC ACCCGGTGGG TGTTATCCGG CACTGTGCCG TCTTCCTTCG TGCAGCACGC GCGTAACGAA ATCGATGCAG CCGGCCGCTC TTTCTTGATT TTCCTAAATG CATTGCGCAA ACACGGCTCA AATGACAGCG TGGAGGGCCG TGTACGGAGC CGGTCACTGA TAGACGCATA CTACCGATAC AGTAGAGCGT TGACCCAGCT CGTTGAATAC CTTCAGTCGG GCGACCTGCA TGGATTCCTC GAGCAGCCGA CACAGGATGT GCAGGCTGCG TTCCTTAATG AAGAGCGTCA ATTCCTGCAA TACGGCAGGG TTGTCGGCGC GGTTTCGGTG TATGCAATGC ACGAGCGTTT CCGCCTTCTT GGAATCGCCT CAACGGTCAT GGCGATCCTG CTCGCCGCGA CCGCGATTGC GTTCGTCGTC GCCAGACGAA GGGAGAAACT GAACCTGCTG TCCCTTGCAT TGAATCACAC CGATAGCGCC GCAGTCGTGA CCACACCGGA CGGCCGGGTC GTATACGCGA ACGAGGGATT CACGCAGATG TTGGGGTACA AGATGTCGGA GATACTCGGC AAACGTCCGA CCGACTTCGT GGTCGGGCCT TATTCGGACT TCGGCACGGT CAGTGATATT CGTGCGAAGG TGGGCGCTCA CCTGAGCTTT AAGACCAAGA TTCTCGTCTA TAGCAAGAGC GGCCACCCGT TATGGATCCT GGCCACAGTC AATCCGGTGT TCGACGCAAG GGGCGTGTGC AAGAACGTCG TCGGAATCTG GACTGACATT ACCAGTACGA AAATACACGA GGAGCTTCAG CGCAAGGTGC TGGGCGCGAT GGCACGGGAA GAGCCTTTGG CCAATGTTAC GACACTTGTG TGCCACGAAG CAGAGCGGAT CGCGCCGGCC GTGACGGCAT CGATCAGACG AATCGATGAC GACGGTAAGC TATGGACGCT CGCGGCACCA AGCTTGCCGA TGGAATATGC GAGGGCGATT GATGGGTTGC GTATCGCCCC CGACTTCGTA GAGCGGATCG CTGCGGGCCC GTTCGGCAGA CACATTGCAT TTCCCACCAC ATCGCCGGAC GAAGCCTACG CATCGCACAG CGCGCTCGCA ATCTCGTTTG GGTTCACGTC GTGCTGGTGG CATCCAATCC GGTCTACCGA TGGGCGCACG CTCGGCACGC TCTCGTTCTA CTATCGCGAG TCACACCAAC CCAGTGCGCT TCATCAGGAG CTTGTGGACG CCAGTCTGAA TTTGTGCGCG TTGGCATTGG AGCGAGAAGG AAGCAAGGAG CGCATTCGCC GTCTCGCCTT CTATGACGGC CTGACCGGAT TACCTAATCG ACAGCTGCTG ATGAGTCAAG CTGAGTCGGT GCTTGCCGCC GCCGTCGCGA GTCAGCATTC GTTCGCGGTG ATGTTTGTCG ATCTCAACAG CTTCAAGCAG GTGAACGACA CGCTGGGGCA CGCGGCGGGA GACGGTTTGC TGAGCGAAGT TGCACAGCGC CTCAAGATTG ACCTGCGCGA TACGGATATT GTCGGTCGGC TGTCGGGCGA TGAGTTCGTG ATCGTTCTGT CACCGGCCGA CATTGAACTG ACGCTCGACT TTGCGGAACG AACGATGAAC AGGTTGCGCC AGCCCGTCCA GATTAGTGAC ACGAACCTGA GGCCCGCGGC GAGCATGGGC ATCGCGATCT TTCCGCAGCA CGGCGAGAGC ATTGGTGCGT TGATGCAGCA TGCCGACATG GCCATGTATG AGGCGAAGTT CGCCGGACAC CACGAGTATC GAGTCTTTGA GCCAGAACTG ATGCGTGCGA GGGAGGCGCG CCGGAAGCTC GGGCTGGCAC TGCGCGACAG CCTCGTCGCG GGGGAGTTGC AACTTCACTA TCAGCCTCAG GTGCGTCTGG ATGATGATAG TTTGTACGGA GTCGAAGCGC TTGCGCGCTG GTTTCATCGT GATTTTGGCA ACGTGGCGCC GGACCATTTC ATCCCGCTTG TCGAGGAGTG CGGACTGGTT GCGGAGTTCA ATCGATGGGT ATTGACCGAG GCGTGCCGGC AATTGGCGCA ATGGTGCGAA GCCGGTCTAG ATGTTCCCCG GATATCGGTC AACATTTCGC CCACGGCGTT TCGCGATCCT GCGTTCGCTT CCCTGGTAAG CAGTCTGCTG GGGACGTACA AACTTGCGCC TTCTCAGTTG ACGCTTGAGG TCACCGAGGC CGTGTTGCTC GACGCGACGG ATAGCGTAAT GACAACTATT CAAGACGTTC ATTCCCTCGG CGTCAATATG GCGATCGACG ATTTCGGTAC GGGGTACTCG AGCCTCAGCT ATTTGCGGCG GTTGCCTGTG AACGAGGTGA AGCTGGACAA GAGCTTTATC AGCAACGTTG AAAACAGCGA GAATGCGAGA TCGCTTGTCA ACTCGGTCGC CGACATCTGT GCCAAGCTAC ATTTGACGAT CGTTGCCGAA GGCGTGGAAA CCGACGTTCA GCGACAGATA CTTCAGGCAC GGGGCTACCA AGTCGCTCAA GGGTATCTCT TTTCGCCGCC TATTGAGGCG GCCGAACTGC CAGTCTGGAT CAATGTGACT TTGTCTGGAC GCATATGA
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Protein sequence | MFNRIRLPRR LVLISIFVLQ LLTLGASCWI LSRTWENVEF MSNVTITEVD AIMQTTEHLS DARITLSRAA TRWVLSGTVP SSFVQHARNE IDAAGRSFLI FLNALRKHGS NDSVEGRVRS RSLIDAYYRY SRALTQLVEY LQSGDLHGFL EQPTQDVQAA FLNEERQFLQ YGRVVGAVSV YAMHERFRLL GIASTVMAIL LAATAIAFVV ARRREKLNLL SLALNHTDSA AVVTTPDGRV VYANEGFTQM LGYKMSEILG KRPTDFVVGP YSDFGTVSDI RAKVGAHLSF KTKILVYSKS GHPLWILATV NPVFDARGVC KNVVGIWTDI TSTKIHEELQ RKVLGAMARE EPLANVTTLV CHEAERIAPA VTASIRRIDD DGKLWTLAAP SLPMEYARAI DGLRIAPDFV ERIAAGPFGR HIAFPTTSPD EAYASHSALA ISFGFTSCWW HPIRSTDGRT LGTLSFYYRE SHQPSALHQE LVDASLNLCA LALEREGSKE RIRRLAFYDG LTGLPNRQLL MSQAESVLAA AVASQHSFAV MFVDLNSFKQ VNDTLGHAAG DGLLSEVAQR LKIDLRDTDI VGRLSGDEFV IVLSPADIEL TLDFAERTMN RLRQPVQISD TNLRPAASMG IAIFPQHGES IGALMQHADM AMYEAKFAGH HEYRVFEPEL MRAREARRKL GLALRDSLVA GELQLHYQPQ VRLDDDSLYG VEALARWFHR DFGNVAPDHF IPLVEECGLV AEFNRWVLTE ACRQLAQWCE AGLDVPRISV NISPTAFRDP AFASLVSSLL GTYKLAPSQL TLEVTEAVLL DATDSVMTTI QDVHSLGVNM AIDDFGTGYS SLSYLRRLPV NEVKLDKSFI SNVENSENAR SLVNSVADIC AKLHLTIVAE GVETDVQRQI LQARGYQVAQ GYLFSPPIEA AELPVWINVT LSGRI
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