Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6789 |
Symbol | |
ID | 6125704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 888413 |
End bp | 889099 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641647799 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001774391 |
Protein GI | 170735277 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.356042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAAAC TCGCTCTTGC GCTCGCACTC TCCGCAACGG CCCTCGCCGC GTGCTCCACC GCATCCGGCC CGACCTTCAG CGCCTCCGAA CTGCAGCCGC GCGACGGCGT GCGTACCTTC CAGGTGGACT GCCACGGCCT GCTGTCGGGC CCGCAGACCT GCATGAAGGC CGCCCGCAAG ATTTGCGGCG AAGCGCCCGT GCGCGCCGTC GACTCGGCCC GCGCGCTGCG CGACAAATCC GATCCCGCGA CGCTCGTCTT CCAGTGCGGC GACGGGAATG CACAGGCATC TACCGTGGAC ACGGGTGCGC CGCCTCCGGC CGCCGTTGGT GCGCCGATAC CGAAACGAGT GACGCTGTCA GGCGACGCGA ACTTCGACTT CAACCAGGCG ATACTGACGC CGGCGGCGAT GCAGCAGCTC GACAAGGTGA TCGCGAACGG GAAGGGCATG ACTTTCGGAA CCGTCGGCAT CAGCGGCTAT ACCGATGGGC TCGGCACGGA CACTTACAAC CGTCGGTTAT CAGAGCAGCG TGCGCAGGCC GTGGCGAGCT ATCTGCAAGC GCACGGACTG AATGCGAGGC GATTTGAGAT CCACGGATAC GGGGCGGAAC GCCCCGTCGC GTTGAACAAC ACGGCGCTAG GTCGTGCACA GAATCGTCGC GTCGAGATTG TCCTGCCCGA GATGTAA
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Protein sequence | MNKLALALAL SATALAACST ASGPTFSASE LQPRDGVRTF QVDCHGLLSG PQTCMKAARK ICGEAPVRAV DSARALRDKS DPATLVFQCG DGNAQASTVD TGAPPPAAVG APIPKRVTLS GDANFDFNQA ILTPAAMQQL DKVIANGKGM TFGTVGISGY TDGLGTDTYN RRLSEQRAQA VASYLQAHGL NARRFEIHGY GAERPVALNN TALGRAQNRR VEIVLPEM
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