| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6779 |
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| Symbol | |
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| ID | 6125699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 873878 |
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| End bp | 875968 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641647794 |
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| Product | type III secretion FHIPEP protein |
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| Protein accession | YP_001774386 |
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| Protein GI | 170735272 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.702443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGA TCGACCTACT CAAGCGCCTG AAGTTTGCTG CGCCCCTCGC CCTGTTCACC
ATCCTGGCGA TGGTAATCCT GCCGCTTCCG CCAGCCGCGT TGGACATCAT GTTCACGTTC
AACATCGTGC TGTCCATCGT GGTGGTCATG GTGGCCGTGA CCGTGAAGCG ACCGCTGGAC
TTCTCGGCCT TCCCGACCAT TATCCTGGCT GCCACGCTGA TGCGCCTGAC ATTGAACGTC
GCATCGACAC GCGTCGTTTT GCTCAATGGC TACACGGGCG CGAGCGCAGC CGGTCAAGTG
ATCGAATCGT TCGCCAATGT GGTGATCGGC AGCAACTTCG TGGTCGGGCT GGTCGTGTTC
GTGATCCTGA TGATCATCAA CTTCGTCGTG GTCACCAAGG GTGCGGAGCG CATCTCGGAA
GTGTCGGCGC GTTTCACCCT CGACGCGCTG CCCGGCAAGC AGATGGCCAT CGACGCCGAT
CTGAACGCCG GTGTCATCAC ACAGGCACAA GCCCAGCAAC GCCGCAAGGA CGTTACGACC
GAAGCCGACT TTTACGGCGC CATGGATGGC GCCTCGAAGT TCGTGCGCGG CGACGCCATC
GCCGGCATTC TGATTCTCAT CACGAACATG ATCGGTGGCG TGATCATCGG CGTAATCATG
CACGGCTTGC CTGCAGGCGA GGCATTCCAC AAGTATGCGC TGCTGGCCAT CGGGGACGGC
CTGGTCGCGC AAATACCCGC CCTCCTGCTG TCCGCCGCCG CCGCGGTCAT TGTCACCCGC
ATCGACGATG CACGCGACTT CGAGGAACAG GTCGGCCAGC AATTGCTGGC TTCGCCGTTG
GTGCTGTTCA GCGCTTCCGC ACTGATGGCC GCGCTGGGCC TGATCCCGGG CATGCCGACA
TTGGTGTTTC TGTGCTTTGC AGCAGTACTT TGCTACGTCG GCTATCGGAT GACGCAGCGT
ACTTCGCCCA CCGCCGCGAT CGAGGCGGAA GAAACCGCCC GCGTCATGCA AGCTACGCTA
GCCGCGCCCG GCAATGAATC GTTCGACTGG AGCAGCCTGC CGTATGTGGA CGCGCTTTCG
GTGTCCCTCG GCTACAAGCT TGTGGATATG TTGGACCGCG CTCAGGGCGC ACCGCTGGTG
CGCCGCCTGC ATGGCACCCG ACAAACCCTA TCGGAACAGC TCGGCTTCCT GCTACCGGCC
ATCGGCGCGC GCGACGACAT GAGCCTGCCC CCCTCCAGTT ACACCATCAT GCTCAATGGC
ACCACACTGG CTCAGGCCCA AGTGCAACCG GGAAAGCTGA TGGCCATTCC GTCACCTACC
GTCTATGGGG AATTGGATGG CACACCCGAC ATCGACCCTG CCTACGGCAT GTCCGTCACG
TGGATCGAGC CCGACCAGAA GGCCCATGCA CTCGGCCTCG GCTATCAGGT TGTCGATTGT
GCGACGGTGA TCGCCACTCA TGCGGCCAAG TTAATTCGCG AAACGATTCC CGACCTGTTC
AGCTACGACA ATGTGACCGC CATCATCGAA CGCCTGACGG CCATTGCGCC CGTGCTGGCC
GATGCGCTGG GGAAATGCCT CACGCACAGT CAGTTGCGCA AGGTGTTCCG TACGTTGCTG
GCCGAGAACG TGTCGATCAA GGACATCGAA ACCGTGTCCG CCACGCTGGT GGAGGCTGCG
GAAACGACCA AGGACCCGCT ACTGCTCGCG GCTGAAGTCC GTTGCGCACT GCGTCGCCAG
ATCGTGGCAG GACTTGGCGC CCAGTACGAG GCGCTCCAGG GTTTCAGCCT GACGGTGGAA
CTCGAGAACA TTCTGCTGAA TGCGCTAAGT CTCGCAGAGC AATCGGGCAC GCGTGTGCCG
CTGGACAACT TCCCGGTCGA ACCGAACGTG CTATCGCAGT TGCAGACCCA TATGCCGGCG
GTGGTCGAAC AATTGAAACA AATGGGCGCC GCCCCAGTGT TGATCGTGGT GCCGCGCATT
CGCCCGATGC TCGCGCGGTA CGCCAAACTG TTCTCTCCGG ACCTAACCGT CCTGTCGTAC
AACGAAGTTC CCGACAACAA GGAAGTCAGC ATTGTCGGCA CGCTTGGATG A
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| Protein sequence | MNVIDLLKRL KFAAPLALFT ILAMVILPLP PAALDIMFTF NIVLSIVVVM VAVTVKRPLD
FSAFPTIILA ATLMRLTLNV ASTRVVLLNG YTGASAAGQV IESFANVVIG SNFVVGLVVF
VILMIINFVV VTKGAERISE VSARFTLDAL PGKQMAIDAD LNAGVITQAQ AQQRRKDVTT
EADFYGAMDG ASKFVRGDAI AGILILITNM IGGVIIGVIM HGLPAGEAFH KYALLAIGDG
LVAQIPALLL SAAAAVIVTR IDDARDFEEQ VGQQLLASPL VLFSASALMA ALGLIPGMPT
LVFLCFAAVL CYVGYRMTQR TSPTAAIEAE ETARVMQATL AAPGNESFDW SSLPYVDALS
VSLGYKLVDM LDRAQGAPLV RRLHGTRQTL SEQLGFLLPA IGARDDMSLP PSSYTIMLNG
TTLAQAQVQP GKLMAIPSPT VYGELDGTPD IDPAYGMSVT WIEPDQKAHA LGLGYQVVDC
ATVIATHAAK LIRETIPDLF SYDNVTAIIE RLTAIAPVLA DALGKCLTHS QLRKVFRTLL
AENVSIKDIE TVSATLVEAA ETTKDPLLLA AEVRCALRRQ IVAGLGAQYE ALQGFSLTVE
LENILLNALS LAEQSGTRVP LDNFPVEPNV LSQLQTHMPA VVEQLKQMGA APVLIVVPRI
RPMLARYAKL FSPDLTVLSY NEVPDNKEVS IVGTLG
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