| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6681 |
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| Symbol | |
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| ID | 6125603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 755817 |
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| End bp | 759008 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641647693 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001774290 |
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| Protein GI | 170735176 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0860395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0938677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TCTTTATCGA TCGCCCGATC TTCGCGTGGG TGATCGCGAT CGTGCTGATG
CTGGCCGGCG TTGCATCGAT CTTCAAGATG CCGATCGCGC AGTATCCGAC GATCGCACCG
CCGACGATCC AGATCCAGGC GAACTATCCG GGCGCTTCCG CGAAGACGGT GGAAGACACG
GTGACGCAGG TGATCGAGCA GCAGATGAGC GGGCTCGACA ACTTCCTGTA CATGTCGTCG
ACGAGCGACG ATTCAGGCAA CGCGACGATC ACGCTGACCT TCTCGCCGGG CACGAATCCG
GATGTCGCGC AGGTGCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGAA CCTGCCGCAG
GTCGTGCAGC AGCTCGGCAT GCAGGTCACG AAGTCGAGCA GCAACTGGCT GATGTGGTTC
GCGTTCAACT CCGAGGACGG CCGGATGTCG AAGGAGGACC TGACGAACTA CGTGGCCTCG
CACGTGCTCG ATCCGCTGAG CCGCGTGAAC GGCGTCGGCC AGACGCTGCT GCTCGGTTCG
CAGTTCTCGA TGCGGATCTG GCTCGCCCCG ATCAAGCTGA CCAACTACAG CCTCACGCCG
ACCGACGTGA CGGCCGCGAT CACGCAGCAG AACGTGCAGA TCGCGGGCGG CCAGATCGGC
GGTACGCCGG CGAAGCCGGG CACCGTGCTG CAGGCGACGA TCACCGAATC GACGCTGCTG
CGCACGCCCG AGCAATTCGG CAACATCCTG CTGAAGGTCA ACCAGGACGG CTCGCAGGTT
CGCCTGAAGG ACGTCGGCCG CGCGGCGCTG GGTTCGGAGA ACTACACGTT CGACACGAAG
TACATGGGGC AGCCGACGGC CGGCCTCGGC ATCCAGCTCG CGACCGGCGC GAACGCGCTG
GCGACCGCCA ACGCGCTGCG GGCCAAGATC GACGAGCTGT CGAAGTACTT CCCGCACGGT
CTCGTCGTGC ACTACCCGTA CGACACGACG CCGTTCGTGC GCCTGTCGAT CGAGGAAGTG
GTCAAGACGC TGATCGAGGG CATCGTGCTC GTGTTCCTCG TGATGTACCT GTTCCTGCAG
AACCTGCGCG CGACGATCAT CCCGACGATC GCGGTGCCGG TCGTGCTGCT CGGTACGTTC
GCGATCATGG GCCTCGCCGG GTTCTCGATC AACACGCTGT CGATGTTCGG CCTCGTGCTC
GCGATCGGCC TGCTGGTCGA CGATGCGATC GTGGTGGTGG AGAACGTCGA ACGCGTGATG
GCGGAGGAAG GGCTGTCGCC GAAGGAGGCG ACCCGCAAGG CGATGAGCCA GATCACCGGC
GCACTCGTCG GCGTGGCGCT CGTGCTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCCGGC
GGCTCGGTCG GCGCGATCTA TCGTCAGTTC TCGCTGACGA TCGTGTCGGC GATGGTGCTG
TCCGTGCTCG TCGCGTTGGT CCTGACGCCG GCCCTGTGCG CGACGATCCT GAAGCCGATC
GAGAAGGGTC ATCACGAAGA GAAGAAGGGC TTCTTCGGCT GGTTCAACCG GACGTTCGAT
CGCAGCCGCG ATCGCTACAC GAGCGGCGTG AACCACGTGA TCAAGCGCTC GGGCCGCTGG
CTCGTGATCT ATCTCGCCGT GTTCCTCGCG GTCGGCGTGA TGTTCGCGCG GCTGCCGAAG
TCGTTCCTGC CCGACGAGGA TCAGGGCTAC ATGTTCATGA TCGTGCAGAC GCCGTCCGGC
TCCACACAGG AAACGACCGG CAAGACGCTC GACAACATCA ACACGTACCT GACCACCGCC
GAGAAGGACG TGGTCGACTC GGTGTTCACG GTCAACGGCT TCAGCTTCGC GGGCCGCGGC
CAGAATGCGG GCCTCGTGTT CGTGAAGCTG AAACCGTACG AGCAGCGCCA GCGTTCGGAC
CAGAAGGTGC AGGCGCTGAT CGGCCGGACC TTCGCGCACT ATTCGACGTA TAAGGACGGG
ATGGTGATTC CGTTCAACCC GCCGTCGATT CCCGAACTCG GCACGGCCGC CGGCTTCGAC
TTCGAGCTGA CGGACAACGC CGGCCTCGGT CACGAAGCGC TGATGGCCGC GCGCGGGCAG
TTGCTCGGGC TGGCCGCGAA GGATCCGGCG CTGGCGCTGG TGCGCCCGAA CGGCCTGAAC
GACACGCCGC AGTACAAGGT CGACATCGAT CGCGAGAAGG CGAACGCGCT CGGCGTGACG
GCCGCGGCGA TAGACCAGAC GTTCTCGATC GCATGGGCGT CGCAGTACGT GAACAACTTC
CTCGACACCG ATGGCCGGAT CAAGAAGGTG TACGTACAGT CGGACGCGCC GTTCCGGATG
ACGCCGGAGG ATATGAACAT CTGGTACGTG CGCAACAGCG CGGGCGGGAT GGTGCCGTTC
AGCGCGTTCT CGACCGGTCA CTGGATCTAC GGGTCGCCGA AGCTCGAGCG TTACAACGGC
GTGTCGTCGA TCGAGATCCA GGGGCAGGCC GCGGAAGGCA AGTCGACCGG CCAGGCGATG
GCCGCGATGG AAGCGCTCGC GAGCAAGCTG CCGGAAGGCA TCGGCTATTC GTGGACGGGC
CTGTCGTTCC AGGAAATCCA GTCCGGCTCG CAGGCGCCGA TCCTGTACGC GATCTCGATC
CTCGTCGTGT TCCTGTGTCT CGCGGCGCTG TATGAAAGCT GGTCGATTCC GTTCTCGGTG
ATCATGGTCG TGCCGCTCGG CGTGGTCGGC GCGCTGCTCG CGACGATGCT GCGCGGTCTC
GAGAACGACG TGTTCTTCCA GGTCGGCCTG CTGACCACCG TCGGCTTGTC TGCAAAGAAC
GCGATCCTGA TCGTCGAGTT CGCGCGCGAG CTGCAGGCGG GCGGGAACAT GGGGCCGGTG
CGTGCGGCGA TCGAGGCGGC GCGCCTGCGG CTGCGTCCGA TCCTGATGAC GTCGCTCGCG
TTCATGCTGG GCGTGCTGCC GCTCGCGATC AGCAACGGCG CGGGTTCAGC CAGCCAACAC
GCGATCGGTA CCGGCGTGAT CGGCGGGATG ATCACGGCGA CGTTCCTCGC CATTTTCATG
ATCCCGATGT TCTTCGTGCG GGTTCGCGCG ATCTTCAGCG GCGAGACGGA AAACGTCGAC
GACGCATGGC GTCTCGTGCA GGGCGACCTG CAGCGCGGTC ACGACGACGC ACACGATTCG
AAGGGGCAGT AA
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| Protein sequence | MAKFFIDRPI FAWVIAIVLM LAGVASIFKM PIAQYPTIAP PTIQIQANYP GASAKTVEDT
VTQVIEQQMS GLDNFLYMSS TSDDSGNATI TLTFSPGTNP DVAQVQVQNK LSLATPNLPQ
VVQQLGMQVT KSSSNWLMWF AFNSEDGRMS KEDLTNYVAS HVLDPLSRVN GVGQTLLLGS
QFSMRIWLAP IKLTNYSLTP TDVTAAITQQ NVQIAGGQIG GTPAKPGTVL QATITESTLL
RTPEQFGNIL LKVNQDGSQV RLKDVGRAAL GSENYTFDTK YMGQPTAGLG IQLATGANAL
ATANALRAKI DELSKYFPHG LVVHYPYDTT PFVRLSIEEV VKTLIEGIVL VFLVMYLFLQ
NLRATIIPTI AVPVVLLGTF AIMGLAGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM
AEEGLSPKEA TRKAMSQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVSAMVL
SVLVALVLTP ALCATILKPI EKGHHEEKKG FFGWFNRTFD RSRDRYTSGV NHVIKRSGRW
LVIYLAVFLA VGVMFARLPK SFLPDEDQGY MFMIVQTPSG STQETTGKTL DNINTYLTTA
EKDVVDSVFT VNGFSFAGRG QNAGLVFVKL KPYEQRQRSD QKVQALIGRT FAHYSTYKDG
MVIPFNPPSI PELGTAAGFD FELTDNAGLG HEALMAARGQ LLGLAAKDPA LALVRPNGLN
DTPQYKVDID REKANALGVT AAAIDQTFSI AWASQYVNNF LDTDGRIKKV YVQSDAPFRM
TPEDMNIWYV RNSAGGMVPF SAFSTGHWIY GSPKLERYNG VSSIEIQGQA AEGKSTGQAM
AAMEALASKL PEGIGYSWTG LSFQEIQSGS QAPILYAISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVVG ALLATMLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQAGGNMGPV
RAAIEAARLR LRPILMTSLA FMLGVLPLAI SNGAGSASQH AIGTGVIGGM ITATFLAIFM
IPMFFVRVRA IFSGETENVD DAWRLVQGDL QRGHDDAHDS KGQ
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