| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6677 |
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| Symbol | |
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| ID | 6125599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 750846 |
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| End bp | 751817 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641647689 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001774286 |
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| Protein GI | 170735172 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.250197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.232288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATC GACACTCCAG CATCCGCCGC CGGCTCATTC ATGCCGGCCT GGCGATCGCG
GCAGGCGCCG CCGCCCACCC GGGTCTTGCG CTGGCCAGCG CGGCCGGCGC GCGTACGTTG
CGCATCGGAT ATCAGAAAGG GCCGCTCAGC CTGCTGAAGG CGCGCGGCAC GCTGCAGGGC
AAGCTCGCGA CACTCGGCGT GAACGTCACG TGGACCGAGT TCCCGTCGGG CCCGCCGCAA
CTCGAGGCGC TGAACGCGGG ATCGATCGAT TTCGGCGACG TCGGCGAAGC GCCGCCGATC
TTCGCACTCG CGGCCGGTGC GCCGCTCGTC TACTACGCGC AGACGCCGGC CGGTCCGGCA
GCCGAAGCCG TGCTCGTCGC GAAGGATTCA CCGGTCAAGA CCTTTGCCGA CCTGCGCGGC
AAGCGCATCG CGCTGGTGAA GGGATCGAAT ACGCACTTCC TGCTGGTGAG GCTGCTGCAG
GCCGCGAAGC TCGGCTATAC CGACGTCACG CCGGTCTGGC TGTCGCCGTC CGATGCGCGG
GCTGCGTTCG AGAACCGTTC GGTCGATGCG TGGATCATCT GGGATCCGTT CCTCGCGGTG
GTCCAGCAGG CATTCGGCGC GCGTATCGTC GCGGACGGCA CGGGGCTCGT CGAGAACCGC
AGCTACTATT TCGCGTCGCG CACGTACGCG CAGCGCAATG CCGACGTGCT CGACGCGGTC
GTGTCGGAAC TGGCGACGGT CCAGCGCTGG CTCGACGCGA ACCGCGCGCA GGGCGCGGCC
GAATTCTCGA AGCTGTGGGG CATTCCGGAG CCGGCCGTGG CGCTCGCGTT TCGCCGCGCG
CGCTTCGGCG TCGAGCCCGT CACCCGCGAC ACGCTTGCGT ACCAGCAGCG CATCGCGGAC
GTGTTCTATC AGGCCGGCAT CCTGCCGAAA CGCGTCGACG TCAGCCTCGC TGCGCCGCCC
TCGCTCGCGT GA
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| Protein sequence | MADRHSSIRR RLIHAGLAIA AGAAAHPGLA LASAAGARTL RIGYQKGPLS LLKARGTLQG
KLATLGVNVT WTEFPSGPPQ LEALNAGSID FGDVGEAPPI FALAAGAPLV YYAQTPAGPA
AEAVLVAKDS PVKTFADLRG KRIALVKGSN THFLLVRLLQ AAKLGYTDVT PVWLSPSDAR
AAFENRSVDA WIIWDPFLAV VQQAFGARIV ADGTGLVENR SYYFASRTYA QRNADVLDAV
VSELATVQRW LDANRAQGAA EFSKLWGIPE PAVALAFRRA RFGVEPVTRD TLAYQQRIAD
VFYQAGILPK RVDVSLAAPP SLA
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