| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6659 |
|---|
| Symbol | |
|---|
| ID | 6125581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 727870 |
|---|
| End bp | 728844 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641647671 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001774268 |
|---|
| Protein GI | 170735154 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAA CCTGGCTCTC GGCAGGGCAA GTCCTGCTCA CCCTGATCGT CGTCATCGTG
GCCGGCCTCG TGCTGTGGCG CATCATCAAC TACTACATGT TCTCGCCGTG GACGCGCGAC
GGGCACGTGC GCGCCGACGT GATCCAGGTC GCGCCGGACG TGTCGGGCCT CATCACGTCG
GTGCAGGTGG CCGACAACCA GGAGGTCAAG CGCGGCCAGG TGCTGTTCGT GATCGACCAG
GCGCGCTACA CGCTCGCGGA GCGGCTCGCC GAAGCGACGC TCGCGCAGCG TCGCGCGACG
CTGGCGCAGG CGAAGCGCGA ATACGCGCGC AACCTCCAGC TCGGCAACCT GGTCGCAAGC
GAACAGGTCG AGGAAAGCCG CACGCGCGTC GAGCAGGGCG AAGCCAGCGT CGCCGACGCG
CAGGTGTCGC TCGATACCGC GAAGCTGAAC CTGCAGCGCA CGACGATCGT CAGCCCCGTG
GACGGCTACC TGAACGACCG CGCTCCGCGC GTCGGCGAAT ACGTGCCGGC CGGCCGCGCG
GTGCTGTCGG TGGTCGACCG CAACTCGTTC CGCGTCGACG GCTACTTCGA GGAAACCAAG
CTGCGGGGCA TCCATATCGG GCAGCCGGTC GACATCATCG TGATGGGCGA GCCGCATGCG
CTGCGCGGCC ACGTACAGAG CATCGTCGCC GCGATCGAGG ATCGCGACCG CACGCAGGGC
GCGAACCTGC TGCCGAACGT GAACCCGGCA TTCAGCTGGG TGCGGCTCGC GCAGCGCGTG
CCGGTGCGTG TCGTGCTCGA CGAGGTGCCC GACGATTTCC GGATGATCGC GGGCCGCACC
GCGACCGTGT CGATGCGCGG CGCCGACGCG CGCCGCAACG ACGCGAAGCC GGCTGGCGCC
AGCACCGCAT CGGCGGCCGC GCCGGTTCCC GCTGCTTCCG GTACGGTCGC GAGCGCCGCG
GGAGCATCGC AATGA
|
|---|
| Protein sequence | MKKTWLSAGQ VLLTLIVVIV AGLVLWRIIN YYMFSPWTRD GHVRADVIQV APDVSGLITS
VQVADNQEVK RGQVLFVIDQ ARYTLAERLA EATLAQRRAT LAQAKREYAR NLQLGNLVAS
EQVEESRTRV EQGEASVADA QVSLDTAKLN LQRTTIVSPV DGYLNDRAPR VGEYVPAGRA
VLSVVDRNSF RVDGYFEETK LRGIHIGQPV DIIVMGEPHA LRGHVQSIVA AIEDRDRTQG
ANLLPNVNPA FSWVRLAQRV PVRVVLDEVP DDFRMIAGRT ATVSMRGADA RRNDAKPAGA
STASAAAPVP AASGTVASAA GASQ
|
|---|
| |