Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6615 |
Symbol | |
ID | 6125538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 678873 |
End bp | 679607 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641647628 |
Product | LrgB family protein |
Protein accession | YP_001774225 |
Protein GI | 170735111 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.918495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.128036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGT TCCCGAAGCT CGGCGCGATC TGGGTCTATC TCGCCGCGAG CCCGCTGCTG GGCCTGACCA TCACGCTGGT CGCGTATCTG TTCGCGCAGG CCGTCTATGC GCGGGCGCGT TTCAATCCGC TGGCGAATCC GGTGCTGATC GCGGTCGCGG TGATCGTCGT GCTGCTGACG CTCACGCATA CGCCGTATCC CACGTATTTC GAAGGCGCGC AGTTCGTCCA CTTCCTGCTC GGCCCGGCGA CCGTCGCGCT CGCGCTGCCG CTATACCGCC AGTGGTCGAA GCTGCGGCGC ACCGCGTTGC CGCTGCTCGT CGGCCTGCTC GCGGGTTCGC TGACCGCGAT CGTGTCGGCG GTCGGTATCG CCGCGCTGTT CGGGGCGTCC CATCAGACGA TCGCGTCGCT CGCGCCGAAA TCGGCGACGA CGCCGATCGC GATGGCCGTC GCCGCGGAGA TCGGCGGCAT TCCGTCGCTC ACGGCCGTGC TCGTGATCTC GACCGGGATT TTCGGCGCGG TGTGCGCGCG CGCGATCCTC AATCTGCTGA GGATCGACGA GCCGGCCGTG CGCGGCTTCG CGCTCGGCGT CGCGTCGCAC GGAATCGGCA CCGCGCGCGC GTTCCAGGTC AGCGAGGAAG CCGGCGCGTT CGCCGGGCTC GGGATGGGGC TGAACGGCGT GCTGACGGCG TTCGTCGTGC CGATTCTGCT GCCGGTGCTG TCGCGCTGGA TCTGA
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Protein sequence | MTAFPKLGAI WVYLAASPLL GLTITLVAYL FAQAVYARAR FNPLANPVLI AVAVIVVLLT LTHTPYPTYF EGAQFVHFLL GPATVALALP LYRQWSKLRR TALPLLVGLL AGSLTAIVSA VGIAALFGAS HQTIASLAPK SATTPIAMAV AAEIGGIPSL TAVLVISTGI FGAVCARAIL NLLRIDEPAV RGFALGVASH GIGTARAFQV SEEAGAFAGL GMGLNGVLTA FVVPILLPVL SRWI
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