Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6588 |
Symbol | |
ID | 6125511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 647839 |
End bp | 649086 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641647601 |
Product | major facilitator transporter |
Protein accession | YP_001774198 |
Protein GI | 170735084 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0439245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAA ACATGAAATC TTCGGCGCTC GGCGGCCCGT CGGCCCCGCG CGTCGAGCAG GTCGGGGCGT ACGCGTGGAA AGCGCTGGCC GGGTCGGCGA TCGGCTATGC GATGGACGGC TTCGACCTGC TGATCCTCGG CTTCATGCTG CCGGCGATCA CGGCGGCGCT GCACCTGACA CCCGGGCAGG GCGGCGCGCT GGTCACGTGG ACGCTGATCG GCGCGGTCGC GGGCGGCATC GTGTTCGGCG CGCTGAGCGA CCGCTACGGG CGCGTGCGGG TGCTGACCTG GACGATCCTG CTGTTCGCGA TCTTCACCGG CCTGTGCGCA TTCGCGCGCG GTTTCGAGGA TCTGCTCGTC TATCGCACCA TCGCGGGCAT CGGCCTCGGC GGCGAGTTCG GGATCGGCAT GGCGCTCGCG GCCGAAGCGT GGCCCGCAGC CAAGCGCGCC CGCGTGTCGT GCTACGTCGC GCTCGGCTGG CAGGTCGGCG TGCTGCTGGC CGCGCTGCTG ACGCCGTTGC TGCTGCTCCA CATCGGCTGG CGCGGCATGT TCGTGGTCGG CGTGCTGCCC GCGCTGCTCG CGTGGGTGAT GCGCAACAAG CTGCACGAGC CGGAAGCGTT CGTGCAGCGC GCGACGCAGC CGAAATCCAA CGCGTTCCGC ATGCTCGTCG CCGATGCCCG CACCGCGCGC ACGAGCGTCG GCATCGCGAT CCTGTGTTCG GTCCAGAATT TCGGCTACTA CGGGATCATG ATCTGGCTGC CGACCTTCCT GTCGAAGCAG ATGGGCTTCT CGCTGACGAA ATCGGGGCTG TGGACGGCGG CGACCGTCGT CGGGATGATG ATCGGCGTCT GGGTGTTCGG CCAACTGGCC GACCGCATCG GCCGCAAGCC GACGTTCCTG CTGTACCAGC TCGGCTCGGT CGTGACGGTC ATCGCCTATG CGCGGCTGTC GGACCCGACG GCGATGCTGT GGGCCGGCGC GCTGATGGGG ATGTTCGTCA ACGGGATGGT CGGCGGCTAC GGGACGCTGA TGTCGGAAGG CTATCCGACG GCCGCACGCG CGACCGCGCA GAACGTGCTG TGGAACATCG GCCGCGCGGT CGGCGGCTTC GGCCCGGTCG CGGTCGGCGC GCTCGCCGCG CACTACTCGT TCCAGACGGC CATCGCGCTG CTCGCCGGCC TGTACGTGCT CGACATGGTC GCGACGCTGT TCCTGATCCC CGAGCTCAAG GGCGTCGAGC TCGAATGA
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Protein sequence | MAANMKSSAL GGPSAPRVEQ VGAYAWKALA GSAIGYAMDG FDLLILGFML PAITAALHLT PGQGGALVTW TLIGAVAGGI VFGALSDRYG RVRVLTWTIL LFAIFTGLCA FARGFEDLLV YRTIAGIGLG GEFGIGMALA AEAWPAAKRA RVSCYVALGW QVGVLLAALL TPLLLLHIGW RGMFVVGVLP ALLAWVMRNK LHEPEAFVQR ATQPKSNAFR MLVADARTAR TSVGIAILCS VQNFGYYGIM IWLPTFLSKQ MGFSLTKSGL WTAATVVGMM IGVWVFGQLA DRIGRKPTFL LYQLGSVVTV IAYARLSDPT AMLWAGALMG MFVNGMVGGY GTLMSEGYPT AARATAQNVL WNIGRAVGGF GPVAVGALAA HYSFQTAIAL LAGLYVLDMV ATLFLIPELK GVELE
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