Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6582 |
Symbol | |
ID | 6125505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 642592 |
End bp | 643503 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647595 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001774192 |
Protein GI | 170735078 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.100226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0117418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTTC ATCGCATCCT TCGATCGCTC GCACGCCTGT GCGCCGCCAG TGCGCTGTGC GTCGCGGCCA GCACGCCGGC ATTCGCCGCG AAGCTCGTGC TGGGCGCGAA GAACTTCACC GAGCAATACG TGCTCGCGGA ACTCACGTCG CAGTACCTGC GCTCGCGCGG CTACGACGTC GAAGTTCGCG CCGGGCTCGG CAGTACGCTC GCCCGCAGCG CGCTGGAGAA CGGCCAGTTC GACCTGATGT GGGATTACAC GGGCACCGCG GCACTCGTCT ACAACAAGAT CCAGGACAAG CTGTCGCCCG AGGAAATGTA CCGGCGCGTC AAGGCGCTCG ACGTGCCGCG CGGGCTCGTG TGGCTCGACG CGTCGCCGCT CAACGACACC TACGCGATCG GCCTGCCGAG CCAGCTCGCG CAGGCCACCG GCATCCGCAC GGTGTCGCAG CTCGCCGAGC ACCTGAAGAC CGATCCGGCG GCGAAGCATT ACGTGTTCGG CATGGACGCG GAGTTCGCGA ATCGCCCCGA TGGCCTGAAG CCGCTGCTCG CCGCCTACGG CATGCAGTTC AGCCGCGCGC AACTGAAGCA GATGGACCCG GGGCTCGTCT ATACGGCCCT GCACAACAAC CAGTTGAAGA TCGGCCTCGT CTATACGACC GACGGACGCG TGAAGGGCTT CGGCATCGTG CCGCTCGAGG ACGACAGGCA CTTCTTCCCG CCGTACAACG CGACGCCCGT GGTCCGTCAG GGCACGCTGG CGCACAACCC GAAGCTCGCG GCGCAGCTCA ACGCGCTGTC GGCCGCGCTC GACAACGATG CGATGCAGGC GATGGCCAAG GCGGTCGACC TCGACGGCAA ATCGCCGCGC GACGTCGCCG ACGAATTCCT GCGTACCCAC CCGCTACCTT GA
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Protein sequence | MTLHRILRSL ARLCAASALC VAASTPAFAA KLVLGAKNFT EQYVLAELTS QYLRSRGYDV EVRAGLGSTL ARSALENGQF DLMWDYTGTA ALVYNKIQDK LSPEEMYRRV KALDVPRGLV WLDASPLNDT YAIGLPSQLA QATGIRTVSQ LAEHLKTDPA AKHYVFGMDA EFANRPDGLK PLLAAYGMQF SRAQLKQMDP GLVYTALHNN QLKIGLVYTT DGRVKGFGIV PLEDDRHFFP PYNATPVVRQ GTLAHNPKLA AQLNALSAAL DNDAMQAMAK AVDLDGKSPR DVADEFLRTH PLP
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