| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6572 |
|---|
| Symbol | |
|---|
| ID | 6125495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 630343 |
|---|
| End bp | 631110 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641647585 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001774182 |
|---|
| Protein GI | 170735068 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.25899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0683418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG CGATTCTCGA AGCGCGCGGC ATCGTCAAGC GGTACGGCAA GTTCACGGCG
CTGGGCGGCG TCGATCTGCG CATCATGCCG CGCACCGTGC ACTCGGTGAT CGGCCCGAAC
GGCGCGGGCA AGACGACGCT GTTCCATACG CTGACGGGCA CGCTGCCGAT CACGTCGGGC
TCGATCCTGT TCGACGGCCA CGACGTGTCG CACGAACCCG ATCACAAACG CGTGCGGCGC
GGCATCGCAC GCTCGTTCCA GGTGACGAGC CTGTTTCCGA ACCTGAGCGT GCGCGAGAAC
CTGCGCGTCG CCGCACAGGG CGTCGAATCG CGGCGGGCGC TGAATCCGTG GACGCCGCCG
CGCGGCGCGC TCGCGCATGA CGGCATCGTC GACGACGTCC TCGAGCGGCT CGGCCTGCAG
CGCTTCGCCG ACACGGCGGC CGGCGTGCTG TCGCATGGCC AGCAGCGCCG GCTCGAGGTC
GGCATGGCGC TGGCGGCGCG GCCGCGCGCG ATCTTCCTCG ACGAGCCGAC GTCGGGCATG
GGCATCGACG ATCTCGACGA CATGAAGGCG CTGATCCGCG GCCTGCGCGA CGACTACACG
GTCGTGCTGA TCGAGCACAA CATGGGCATC GTGATGGACA TTTCGGACAC GATCACGGTG
ATGCAGCAGG GGCGCGTGCT GGTCGAAGGC CAACCCGACG CGATTCGCGG CGACGCGCGC
GTGCGCAGCG CGTATCTCGG CAACATGATC ACCGGAGGCC GCGCATGA
|
|---|
| Protein sequence | MSEAILEARG IVKRYGKFTA LGGVDLRIMP RTVHSVIGPN GAGKTTLFHT LTGTLPITSG
SILFDGHDVS HEPDHKRVRR GIARSFQVTS LFPNLSVREN LRVAAQGVES RRALNPWTPP
RGALAHDGIV DDVLERLGLQ RFADTAAGVL SHGQQRRLEV GMALAARPRA IFLDEPTSGM
GIDDLDDMKA LIRGLRDDYT VVLIEHNMGI VMDISDTITV MQQGRVLVEG QPDAIRGDAR
VRSAYLGNMI TGGRA
|
|---|
| |