| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6518 |
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| Symbol | |
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| ID | 6125441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 574749 |
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| End bp | 575735 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641647531 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001774128 |
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| Protein GI | 170735014 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.431737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACC GATTCACCGG CTCCCGTACC GCCCTGGCCG TCGCGTTGAT GGCCGGCTTC
GCGATGTCCG CGCAGGCGCG CGTGTTCCGC TCGGCGGACG TGCACGGCGA CAACTTTCCG
ACCAACATGG CCGTGAAGTT CATGGGCGAC GCGCTGTCGA AGCAGACGGG CGGCAAGGAT
TCGATCAAGG TGTTCGGCAA CAGCGCGCTG GGCTCCGAGA AGGACACCGT CGATCAGGTG
CGGATCGGTG CGATCGACAT GGCGCGCGTG AACGGCGCGT CGTTCAACGA GATCGTGCCG
GAGTCGCTGA TTCCGTCGTT CCCGTTCCTG TTCCGCGACG TCGATCACTT CCGCAAGGCG
ATGTACGGCC CGGCCGGCCA GAAGATCCTC GATGCGTTCA CCGCGAAGGG AATGATCGCG
CTGACGTTCT ACGAGAGCGG TGCGCGCTCG ATCTACGCGA AGCGCCCGGT GCGCTCGCCG
GTCGACATGA AGGGGCTGAA GGTGCGCGTG CAACCGTCCG ACCTGATGGT CGACGAGATC
CGGGCGATGG GCGGCACGCC GACGCCGATG CCGTTCGCCG AGGTGTACAC GGGCCTGAAG
ACGGGCCTCG TCGATGCGGC GGAAAACAAC CTGCCGTCGT ACGAGGAAAC CAAGCATTAC
GAAGTCGCGC CCGATTACTC GGAGACGCAG CACGCGATGA CGCCGGAAGT GCTGGTGTTC
TCGAAGAAGA TCTGGGACAC GCTGTCGCCG CAGGAGCAGG CGGCGATCCG GAAGGCGGCG
GCCGACTCGG TGCCGTACTA CCAGAAGCTG TGGACCGCGC GCGAGGCGTC CGCGCAGCAG
CTGGTGACGA AGGGCGGCGC GAAGATCCTG CCGGCCGCGC AGATCGACCG CGCGGCGTTC
GTGAAGGCGA TGCAGCCGCT GTGGACCAAG TATGAAAAGA CGCCGCAGAT GAAGCAGATC
GTCGACGAGA TCGAGGCCAC CAAGTGA
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| Protein sequence | MKHRFTGSRT ALAVALMAGF AMSAQARVFR SADVHGDNFP TNMAVKFMGD ALSKQTGGKD
SIKVFGNSAL GSEKDTVDQV RIGAIDMARV NGASFNEIVP ESLIPSFPFL FRDVDHFRKA
MYGPAGQKIL DAFTAKGMIA LTFYESGARS IYAKRPVRSP VDMKGLKVRV QPSDLMVDEI
RAMGGTPTPM PFAEVYTGLK TGLVDAAENN LPSYEETKHY EVAPDYSETQ HAMTPEVLVF
SKKIWDTLSP QEQAAIRKAA ADSVPYYQKL WTAREASAQQ LVTKGGAKIL PAAQIDRAAF
VKAMQPLWTK YEKTPQMKQI VDEIEATK
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