Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6406 |
Symbol | |
ID | 6125329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 440263 |
End bp | 441495 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641647419 |
Product | major facilitator transporter |
Protein accession | YP_001774016 |
Protein GI | 170734902 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.671543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.868743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGACA CCACGCGCCC CGCTCGCCTG AACTTCGCGC TCATGTTGCC GCTGCTGCTG GCGGCCCAGC CGGTGGCGAC CGACAGTTAC TTGCCGGCCC TGCCTGAAAT CGCCGCGACG CTAGGCTCCG CCAGCATCAG TCTCACGGTT TTCGCATTGA TATTCGGTGT CGGACAATTG CCGATGGGCG GTCTTTCCGA CCGCATCGGT CGTCGTCCCG AGTTGCTGAC CGGCCTGGCG CTCTATGCGC TGAGTGCACT GGCGGCGGCG CTCGCGTCGA GCGCCGCGAT GCTGGTGGCC GCGCGTGCGA TGCAGGGCTT TGCGATGGCC GCGATCCTGG TATGCGCGCG TGCGACGGTG CGCGACCGGT ATTCGGCCGG CGACGGCCCG TACGTGATGG CACGCGGTTT CATGGGAATG GGGATGATGG CGTTCCTTGC CCCGATTCTC GGCGCGTATG TCACGCAACA CGCGGGCTGG CGATGGGTAC TCGCGGGGAT GAGCCTGTAT GCGTTCGGCT TGCTCGTCAT GTGCTGGTAC GGCTTCGAGG AAAGCGTTGC CGGAATCGCG CCGGGCCGGA ACTCGACCGG GGACGTGCGC GAGATATTCG GCAATGCCCC GTTCAGGGTA TGGACGCTGC TGGCCGCGTC GACGTACACC GGCATGTTCT GCTTTCTGTT GCTTTCTCCC ACGATTTACA TTCGGCAGCT CGGCATCTCG CCCCAGCGGT ACGGCTGGAT ACCGGCGAGC GGTACGCTTG TCTATGTCCT CAGTACCGTT GGCTGCCGGC ACTTGCTGAG ACGTCAAAGC ATGCTGCGAA CGGTGCGGCA AGGCGCGACG TTGAGCCTGT CAGGCGCGGT GATCCAGGCA TTGGGCTGCG CGCTGCTTCC CGGCAGCATC TGGCCGCTGC TCGTCGGGCA CGGCGTGTAT TGTCTCGGGC ACGGAATCCA TCAGCCATGC GGGCAGGCAG GCGCGGTCAG CGGTCTGCCT CATCTTGCCG GCCGCGCAGT GTCCTGGTCC GGCTTCATCA TGATGTTCTT CGCTTTCAGC GTGGGGCAGA CGGCGGCGGT TTTCACCGAT CCGCGCTATC AGTCCGGCGC ATGGCCGATG GTGGTGCCGA TGCTCGTCGT CGGCGTCACG CTGGTTACGA TCGCGTTTGC GTGGTTGCCG AGAATGGGGG GCGCGACTTT GGTCGCGGCA ACGGTTCCGG CACGGGCGGT GGATGTTCGA TGA
|
Protein sequence | MPDTTRPARL NFALMLPLLL AAQPVATDSY LPALPEIAAT LGSASISLTV FALIFGVGQL PMGGLSDRIG RRPELLTGLA LYALSALAAA LASSAAMLVA ARAMQGFAMA AILVCARATV RDRYSAGDGP YVMARGFMGM GMMAFLAPIL GAYVTQHAGW RWVLAGMSLY AFGLLVMCWY GFEESVAGIA PGRNSTGDVR EIFGNAPFRV WTLLAASTYT GMFCFLLLSP TIYIRQLGIS PQRYGWIPAS GTLVYVLSTV GCRHLLRRQS MLRTVRQGAT LSLSGAVIQA LGCALLPGSI WPLLVGHGVY CLGHGIHQPC GQAGAVSGLP HLAGRAVSWS GFIMMFFAFS VGQTAAVFTD PRYQSGAWPM VVPMLVVGVT LVTIAFAWLP RMGGATLVAA TVPARAVDVR
|
| |