| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6372 |
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| Symbol | |
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| ID | 6125295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 406981 |
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| End bp | 408921 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641647385 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001773982 |
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| Protein GI | 170734868 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.118292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.881452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA AACCGCAACG CACAGGTACC GGCCCGCTGC GCACACGCGT CGCACGGGGC
ACGATGATGG CCGCGATCCT CTGTTCGGGA TGGCTGACCG TGTATGGCGC ACTCGCGCAG
GAAGGCATCG AGTCGGCGGT GCTGACCAAG GGCGGCGCCA GCGTGCCGGC CGCGGTCGGC
AAGGGGCCGA TGCAGATGAC GATCAGCATG GCGCCGGTGC CGGCCGCCGC GCCCGCCGCC
TCGGCGGGGC CGCTGCGCGG GCCGAACTGC GTCGGCGCCG TGCGCGAATC GACCAGCGTC
GCGGTGCCGC TCGGCAAGTC GCTGCTGGTG CCGATGCCGG AGCCGGTCCG CAATCGGACG
ATCGGCAATC CGGCCGTCGC GCAGGCGACG ATGGTGTCGC CGCAAACGCT GTACATCCTC
GGGCTTGCGG TCGGCACGAC CAACATGATC GTGCAGGGCA GGAGCGGCGC ATGCCGCGTG
ATCGACGTCG CGGTCGGCGC GGACGCCGGC GGCCTGCAGG CGTCGCTGCT GCAACTGATG
CCGAACGAGC GCGACATCCA TGTGTCGACC GCGGCCGGCA CGATCGTGCT GGCCGGCACC
GTGTCGAGCT CGCAGGCCGC CCAACAGGCC GTGCAGATCG CCCATGCGTA TGGCGACAGC
GCGGGCGATG CGGCCGGCGG CAAGCAGGGT GGCGGCGTGC TCAACATGCT GAACGTCACG
TCGCCGCAGC AGGTGATGCT CGAGGTGAAG GTGGCCGAGG TGTCGAAGAC GCTGATCAAC
CAGATGGGCA GCGCGTTCAA CATCCAGGGC GGCTTCGGTT CATGGAGCGG CGCGCTGGTC
AGCAACCTGC TCGCGGGCGT CGCGAGCGGC GCCGTGTTCA ACAAGGCGAA CAACAAGCCG
TTCAGCATCG CGGCCGACGC GCAGAACACC GACAACCTCG TCAAGATCCT CGCGGAGCCG
AACCTCGTGA CGATCAGCGG CCAGGAGGCG ACGTTCCTCG CGGGCGGCAA GATCTTCATC
CCGATCCCGC AGAGCGGCAG CAACGGCGTC TCGTCGATCA CGCTGCAGGA AGAGGAATTC
GGCGTCGCGC TGAAGTTCAC GCCGACGGTG CTGGCCAACG GCCGGATCAG CCTGAAGGTC
GCGCCTGAAG TGTCGGAACT GTCGCAGACG GGCGTCACGC TGAGCGCGTC CAACATCGGC
GGCACGTCGA TCCTGCCGCT GATCACGACG CGGCGCGCGT CGACGACGGT GCAGATGAGC
GACGGCGAAT CGTTCGCGAT CGGCGGGCTG ATCAAGGACA ACGCGAGCGG CGCGCTGAAG
GCGATCCCCG GCGTCGGCGA AGTGCCGGTG CTCGGCGCGC TGTTCCGCAG CACGTCGTTC
CAGCAGGACC GCACCGAGCT GATCTTCCTG ATCACGCCGC ACCTGGTGAA GCCGCTGCAG
ACCGCGGACG TCGCGCTGCC GACCGACAGC TTCTCGAAGC CGAACGAAGT CGACGTCTTT
GCGACCGGCA ACATGGAAGG CCGTGGCGGC GTGCGCAAGG CAGGCGCGCA GCCGATGCAA
CCGGCGAACG GCGCAGCCGC TCCGCAGACG CCGGCCCAGG CGCCGGCCCA GGCGCCGGCA
CCTGCTCCGG CGCCGAAGTC GGAAGCACCG GTCGCGCCGG CCGCGCTGCC CGCACCGCGC
GCGCCGCAAG ACGCGGACGT GCAACCGCCG GTGCCGGCCG AGCCGCCGAA GGCGCCGGCG
CCGGTCGCGG CCGCCGCCCC GCAGTCCGAC GCGGCCACCG CGGCGCGTGT CGCGCGCATC
GAAGCCGCCG CCGCGCGCCT CGCGGCCGCC GGCCCCGAAT CGTCGGCCCA GCCGGCGGCG
CGACCGAAGC ACCGGAGCGC GACGGCGCCG AAAGCGCAGA TTGCGCGCGC CGGCGCGGAA
CCCCAGTCCA CCGATCGTTG A
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| Protein sequence | MKIKPQRTGT GPLRTRVARG TMMAAILCSG WLTVYGALAQ EGIESAVLTK GGASVPAAVG
KGPMQMTISM APVPAAAPAA SAGPLRGPNC VGAVRESTSV AVPLGKSLLV PMPEPVRNRT
IGNPAVAQAT MVSPQTLYIL GLAVGTTNMI VQGRSGACRV IDVAVGADAG GLQASLLQLM
PNERDIHVST AAGTIVLAGT VSSSQAAQQA VQIAHAYGDS AGDAAGGKQG GGVLNMLNVT
SPQQVMLEVK VAEVSKTLIN QMGSAFNIQG GFGSWSGALV SNLLAGVASG AVFNKANNKP
FSIAADAQNT DNLVKILAEP NLVTISGQEA TFLAGGKIFI PIPQSGSNGV SSITLQEEEF
GVALKFTPTV LANGRISLKV APEVSELSQT GVTLSASNIG GTSILPLITT RRASTTVQMS
DGESFAIGGL IKDNASGALK AIPGVGEVPV LGALFRSTSF QQDRTELIFL ITPHLVKPLQ
TADVALPTDS FSKPNEVDVF ATGNMEGRGG VRKAGAQPMQ PANGAAAPQT PAQAPAQAPA
PAPAPKSEAP VAPAALPAPR APQDADVQPP VPAEPPKAPA PVAAAAPQSD AATAARVARI
EAAAARLAAA GPESSAQPAA RPKHRSATAP KAQIARAGAE PQSTDR
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