| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6366 |
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| Symbol | |
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| ID | 6125289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 401766 |
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| End bp | 403130 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641647379 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001773976 |
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| Protein GI | 170734862 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.595615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGC GCGAACAGAT GTCCTTGCAC CGGGCCCAGC CGCTGGCGGC CAGCGACGCG
GCCGGCCCGG CCCATTCGTC GGTGCGCGAC GCATACCAGA AGCTGCGCCG CGACATTCAC
CTGGCGGTGC TCGAGCGCGT CGAGCTCGAG CGCCTGTCCC GGCTGCATCA GGATCAGATC
CGCATGGAAA TCGGCGCGCT GATCGCGCGC ATCCTCGACG AGGAGCGGCT GCCGGCGAAC
GACATCGAGC GGCGCCAGCT CGCGATCGAC GTGTACGACG AGATGTTCGG CTTCGGCCCG
CTCGAAGCGC TGCTGCGCGA CCCCGGCATT TCCGACATCC TCGTGAACAC GTACCGGCAA
GTGTACGTCG AGCGCTGCGG CCAGCTCGAA CTGACCGACG TGACGTTCTA CGACGACGCG
CACCTGATGA AGGTGATCGA GAAGATCGTG TCGCGCGTCG GGCGCCGCAT CGACGAATCG
AGCCCGATGG TCGACGCCCG GTTGCCGGAC GGTTCGCGCG TGAACGCGAT CATCCCGCCG
TCCGCGATCG ACGGGCCGCT GATGTCGATC CGGCGCTTCG CGGTCAACCC GCTGAAGATG
GACGACCTGG TGCGCTACCA CAGCCTGACG CCGCCGATGG CCGAGCTGCT CGACGCGCTG
TCGCGCGCGA AGGTGAACGT GCTGGTGTCG GGCGGCACCG GCAGCGGCAA GACGACGCTG
CTCAACATCC TGTCCGGCTT CATTCCGCGC AACGAGCGGA TCGTGACGAT CGAGGACGCC
GCCGAGCTGC AACTGCAGCA GCCGCACGTG CTGCGGCTCG AGACGCGCCC GCCGAACATC
GAGGGCAAGG GCGAGATCAC GCAGCGCACG CTGGTGCGCA ACGCGCTGCG GATGCGCCCC
GACCGCATCA TCCTCGGCGA AGTGCGCGGC GCCGAAGCGC TCGACATGCT CAACGCGATG
AACACCGGCC ACGAAGGCTC GCTCGCGACG ATCCACGCGA ACACGCCGCG CGACGCGCTG
ACGCGGCTCG AGAACATGGT CAGCGTGTCC GGCCTGACGC TGCCGCCGAA GACGATGCGC
CAGCAGATCG CGTCGGCGAT CTCGGTGGTC GTGCAGGCGG CGCGCCTCAC GGACGGCAAG
CGCAAGATCG TCAGCATCCA GGAACTGACC GGGATGGAAG GCGACATCAT CAACATGCAG
GAGATCTTCA CGTTCAAGCG CACGGGCGTG GACCGCGACG GCTCGGTGCG CGGCCACTTC
TGCGCGACCG GCGTGCGGCC GAAGTTCGCC GAGCGGCTGC AGGCGTTCGG TATCAACCTG
CCGGATTCGC TGTACGACCC GTCCGTGCAT TACGAGACGG ACTGA
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| Protein sequence | MSLREQMSLH RAQPLAASDA AGPAHSSVRD AYQKLRRDIH LAVLERVELE RLSRLHQDQI
RMEIGALIAR ILDEERLPAN DIERRQLAID VYDEMFGFGP LEALLRDPGI SDILVNTYRQ
VYVERCGQLE LTDVTFYDDA HLMKVIEKIV SRVGRRIDES SPMVDARLPD GSRVNAIIPP
SAIDGPLMSI RRFAVNPLKM DDLVRYHSLT PPMAELLDAL SRAKVNVLVS GGTGSGKTTL
LNILSGFIPR NERIVTIEDA AELQLQQPHV LRLETRPPNI EGKGEITQRT LVRNALRMRP
DRIILGEVRG AEALDMLNAM NTGHEGSLAT IHANTPRDAL TRLENMVSVS GLTLPPKTMR
QQIASAISVV VQAARLTDGK RKIVSIQELT GMEGDIINMQ EIFTFKRTGV DRDGSVRGHF
CATGVRPKFA ERLQAFGINL PDSLYDPSVH YETD
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