Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6326 |
Symbol | |
ID | 6125249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 337842 |
End bp | 339401 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641647339 |
Product | xylose transporter ATP-binding subunit |
Protein accession | YP_001773936 |
Protein GI | 170734822 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.22602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.758649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAC CCTTGCTGAC GATGCGCGGC ATCGTCAAGG CATTCGACGG CGTGAAGGCG CTCGACGGCA TCGACCTGAC CGTGCGCCCC GGCGAATGCG TCGGGCTGTG CGGCGAGAAC GGCGCCGGCA AGTCGACGCT GATGAAGGTG CTGTCGGGTG TGTACCCGCA CGGCACCTGG GACGGCGAAA TCCGCTGGGA GGGCGCGCCG CTCGCGGCGT CCGGCGTGCG CGACACCGAG CGCGCGGGCA TCGTGATCAT CCACCAGGAA CTGATGCTCG TGCCCGAACT GTCGGTGGCC GAGAACATCT TCCTCGGCAA CGAGATCACG CTGCCGGGCG GGCGCATGAA CTTCGCGGCG ATGGTCCAGC GCGCGGAGGA GCTGCTACGC GAGCTGCGGA TCGACACGAT CAACGTCGCG CAGCCGGTGA TGAACTACGG CGGCGGCCAC CAGCAGTTGA TCGAGATCGC GAAGGCGCTG AACAAGCACG CGAAGCTGCT GATCCTCGAC GAGCCGTCGT CGTCGCTGAG TGCGTCGGAG ACGCGCATCC TGCTCGACAT CGTGCGCGAC CTGAAGCGCC GTGGGGTGGC GTGCGTCTAC ATCTCGCACA AGCTCGACGA GGTGGCGGCC GTGTGCGACA CGGTCACCGT GATCCGCGAC GGACGCCACG TCGCGACCGA GCCGATGGCC ACGCTGACCA CCGACCGGAT CATCGCGATG ATGGTCGGCC GCGAGATCCG CGACCTGTAT CCGCGCGAGC CGCACGAGAT CGGCGACGTC GTGCTCGACG TGCGCCACGT GACGTGCCGC GACGTGACGA ACGCGCGCCG CAAGCGCGTC GACGACGTGT CGTTCAGCGT GCGGCGCGGC GAGATCGTCG GCGTCGCCGG GCTGGTCGGC GCGGGCCGCA CCGAGTTGAT GCAGGCGATC TTCGGTGCGT ATCCGGGCGC GTGCACGGCG AGCGTGACGA TGAACGGCAA GCCGCTGTCG ATCCGCTCGC CGGCCGACGC GATTCGCGCC GGCATCGCGA TGGTGCCGGA GGACCGCAAG CGCCACGGCA TCGTGCCGCA GCTCGGCGTG GGCCACAACA TCACGCTCGC GGTGCTGCGG CGCTTCGCGG CGCGCGGGCG GATCGACGCG GCCGCCGAGC TCGATACGAT CCGCACCGAG ATGCAGCGGC TGTCGGTGCG CGCAGCGCAC CCGTTCCTGT CGATCGCGAG CCTGTCGGGC GGCAATCAGC AGAAGGCGGT GCTCGCGAAG ATGCTGCTGA CCGAGCCGCA GGTGCTGATC CTCGACGAAC CGACGCGCGG CGTGGACGTG GGCGCGAAGG CGGAGATCTA CCGGCTGATC TTCGCGCTGG CCCGGCGCGG CGTCGCGCTG ATCGTCGTGT CGTCGGAATT GCCGGAGGTG CTCGGCCTGG CCGATCGCGT GCTGGTGATC GGCGAGGGCG AGCTGCGCGG CGATTTCGTC AACCAGGGCC TCACGCAGGA ACAGATCCTC GGCGCCGCGC TGAAGCCCGC GCGGCTGCCC GCCGAACCCA CCGCAACGAG TGCAACATGA
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Protein sequence | MTEPLLTMRG IVKAFDGVKA LDGIDLTVRP GECVGLCGEN GAGKSTLMKV LSGVYPHGTW DGEIRWEGAP LAASGVRDTE RAGIVIIHQE LMLVPELSVA ENIFLGNEIT LPGGRMNFAA MVQRAEELLR ELRIDTINVA QPVMNYGGGH QQLIEIAKAL NKHAKLLILD EPSSSLSASE TRILLDIVRD LKRRGVACVY ISHKLDEVAA VCDTVTVIRD GRHVATEPMA TLTTDRIIAM MVGREIRDLY PREPHEIGDV VLDVRHVTCR DVTNARRKRV DDVSFSVRRG EIVGVAGLVG AGRTELMQAI FGAYPGACTA SVTMNGKPLS IRSPADAIRA GIAMVPEDRK RHGIVPQLGV GHNITLAVLR RFAARGRIDA AAELDTIRTE MQRLSVRAAH PFLSIASLSG GNQQKAVLAK MLLTEPQVLI LDEPTRGVDV GAKAEIYRLI FALARRGVAL IVVSSELPEV LGLADRVLVI GEGELRGDFV NQGLTQEQIL GAALKPARLP AEPTATSAT
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