| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6310 |
|---|
| Symbol | |
|---|
| ID | 6125234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 318979 |
|---|
| End bp | 320016 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641647324 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001773921 |
|---|
| Protein GI | 170734807 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.408904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGA ACGAAAGGAA AACCGACATG CTCAGCGTGA TCTGCGAATC CCCCGGCGTG
CTGCGCGTGC AGCAGCGCGA ACTGCCCGTG CGCGGCAGCG GCGAAGTGCT GTTGCGCGTG
CAACGGGTCG GCATCTGCGG CACCGACCTG CACATCTTCA CCGGCAACCA GCCGTACCTC
GACTATCCGC GCGTGATGGG GCACGAGCTT TCCGCGGTCG TCGTCGAGGC GGAACCGGAG
TCGGGTCTCG GCGCGGGCGA CGCGGTGTAC GTGATGCCGT ATCTGTCGTG CGGACACTGC
GTCGCCTGCC GCCACGGCAA CACGAACTGC TGCGTCAACA TCAAGGTGCT CGGCGTGCAT
CGCGACGGCG CGCTCGCCGA ATACCTGAGC GTGCCCGCGC AGTTCGTTCA CAAAGCCGAC
GGCATTTCGC TCGATCAGGC GGCGATGCTG GAATTCCTTG CGATCGGCGC GCATGCGGTG
CGGCGCGCGG ACGTCCGTGC CGGACAGCGG GCGCTGATTG TCGGCGCCGG GCCCATCGGC
ATGGCGGCGA TGATCTTCGC GAAGCTGCGC GGCGCCGACG TCACGTGCCT CGACACGCGA
GCGGATCGAC TGGCGTTTTG CCGACAGCAT CTGGCGGTCG ATGCGGCGGT GGAGGTGGGG
GAAGGCGACA CGGAGCGTCT CGCGTCGTTG ACGAACGGCG AGTATTTCGA TGCGGTATTC
GACGCGACCG GCAACCTCGA TGCGATGAAT CGCGGCTTCG AGTTCGTCGC GCACGGCGGC
AAGTACACGT TGATCTCGAT CGTGCGCGGG CACGTCGCGT TTTCCGATCC CGAATTCCAC
AAGCGGGAAA CCACGTTGCT CGCGAGCCGC AATGCGACGG CCGAGGATTT CGCGACGGTG
CTCGACGCGA TGCGTGCAGG GCGCATTCCG GATCGCGCGC TGAACACGCA CCGGATGCGG
CTGGAAGAGG TGCCGGATGC GCTGCCGCGT TTGCTGGATG CGGGGCAGAC CGTCGTGAAG
GCGCTCGTCG AATGCTGA
|
|---|
| Protein sequence | MNPNERKTDM LSVICESPGV LRVQQRELPV RGSGEVLLRV QRVGICGTDL HIFTGNQPYL
DYPRVMGHEL SAVVVEAEPE SGLGAGDAVY VMPYLSCGHC VACRHGNTNC CVNIKVLGVH
RDGALAEYLS VPAQFVHKAD GISLDQAAML EFLAIGAHAV RRADVRAGQR ALIVGAGPIG
MAAMIFAKLR GADVTCLDTR ADRLAFCRQH LAVDAAVEVG EGDTERLASL TNGEYFDAVF
DATGNLDAMN RGFEFVAHGG KYTLISIVRG HVAFSDPEFH KRETTLLASR NATAEDFATV
LDAMRAGRIP DRALNTHRMR LEEVPDALPR LLDAGQTVVK ALVEC
|
|---|
| |