Gene Bcenmc03_6273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6273 
Symbol 
ID6125199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp272977 
End bp274254 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content68% 
IMG OID641647289 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001773886 
Protein GI170734772 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.106536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGG AATCGTACTG GCTGGATACC CGCCCCGCGT TTCGCGACGG CAGCGTTGGG 
CCCGTCGAAG GGCGGGCCGA TGTGGTCGTG ATCGGTGGCG GTTTCACCGG CTTGTCGGCG
GCGCTCGCGC TCGCGCAGCG CGGCGTCTCG GTGGTCGTGC TCGACGCCGC GGAAGTCGCA
GGCGAAGCGT CCGGCCGCAA CGGCGGCCAG TGCAATACGG GCGTCGCGCA GGACTACGCG
TCGCTGGCCG CACGCATCGG CGCCGCACAG GCGAAGCAGT TTTATCTCGC CTACGAAAGC
GCGGTGAAGA GCGTCGAGAC GATCGTCACC GAACAGGCGA TCGACTGCGA TTTCCGACGG
GCGGGCAAGC TGAAGCTCGC CGCGAAACCG CAGCACTTCG CGGGGCTCGA AAAGACCTTC
AACGCGTTGC GGCGCGATGT CGATCCCGAT ATCGAACTGA TCGAGCCGTC GCAGATTCGC
GATGAAATCG CATCCGACGG TTTCTACGGC GGGCTCCTGC AGCGCAACGG CGCGCAGATG
CACATGGGCA AGTTCGGCGT CGGCCTCGCA CAGGCGGCCG TGCGGGCCGG CGCACGTGTG
TACGAGCACG CGGCCGTCAC GCAGCTCGAC CGGCTCGACG GAGAGCGCCA CAGAATTACC
TGCGCCCGCG GCACGATCGT CGCCGACCGC GTGCTGGTCG CGACCGGCGC GTCGCAGCAC
GGGCCGTTCG CGTGGTTCCG GCGACGCATC GCGCCGGTCG GCAGCTTCAT CGTCGTGACC
GAGCCGCTGC CCGACGCGCA GTTGAACCGA CTGTTTCCGC ATCGCCGTGC GTACGTGACG
TCGCGCCAGA TCGGCAACTA CTTCCGCGTG ACGCCCGACA ACCGGCTGCT GTTCGGCGGC
CGCGCGCGTT TCGCGATGTC GAGCCCGCGC TCCGATGCGA AGAGCGGCGA CATCCTGCGC
GCCGGGATGG CCGGCTATTT CCCCGAGCTG GCCAACGTGC GCCTCGACTA CTGCTGGGGC
GGCCTGGTCG ATATCACCGC CGACCGGCTG CCGCGCGCGG GCCAGCACGA CGGACTCTAT
TACTCGATGG GCTACAGCGG TCACGGCGTG CAGATGTCGG TGCACATGGG CCGCGTGATG
GCCGACGTGC TGTATGGCGC GGCCGCGTCG AACCCGTGGC GCGAACTCGA ATGGCCGGCG
ATACCGGGCC ATTTCGGACA CGCGTGGTTC TTGCCGCTCG TCGGCGCGTA TTACCGGATG
CAGGATTTCC TGCATTGA
 
Protein sequence
MKLESYWLDT RPAFRDGSVG PVEGRADVVV IGGGFTGLSA ALALAQRGVS VVVLDAAEVA 
GEASGRNGGQ CNTGVAQDYA SLAARIGAAQ AKQFYLAYES AVKSVETIVT EQAIDCDFRR
AGKLKLAAKP QHFAGLEKTF NALRRDVDPD IELIEPSQIR DEIASDGFYG GLLQRNGAQM
HMGKFGVGLA QAAVRAGARV YEHAAVTQLD RLDGERHRIT CARGTIVADR VLVATGASQH
GPFAWFRRRI APVGSFIVVT EPLPDAQLNR LFPHRRAYVT SRQIGNYFRV TPDNRLLFGG
RARFAMSSPR SDAKSGDILR AGMAGYFPEL ANVRLDYCWG GLVDITADRL PRAGQHDGLY
YSMGYSGHGV QMSVHMGRVM ADVLYGAAAS NPWRELEWPA IPGHFGHAWF LPLVGAYYRM
QDFLH