Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6263 |
Symbol | |
ID | 6125190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 261790 |
End bp | 263085 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647280 |
Product | major facilitator superfamily metabolite/H(+) symporter |
Protein accession | YP_001773877 |
Protein GI | 170734763 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.268636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.400634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCCCT CGTCCAGCCT TCCGGCCGAA CGCTCGAAGG CCGCCGCGAT CTTTCGCGTC ACGGCCGGCA ACTTTCTCGA GCAGTTCGAC TTCTTCCTGT TCGGCTTCTA CGCCACGCAG ATCGCCAACG TCTTCTTCCC CGCGCAAAGC GAATTCGCAT CGTTGATGAT GACCTTCGCC GTGTTCGGCG CCGGCTTCCT GATGCGTCCG CTCGGCGCGA TCGTGCTGGG CGCGTACATC GACGAGGTCG GCCGCCGCAA GGGCCTGATC GTCACGCTGT CCATCATGGC GAGCGGCACC ATCCTGATCG CGTTCGTGCC GGGCTACGCG ACGATCGGGC TGCTGGCGCC CGTGCTCGTG CTGATCGGCC GGCTGCTGCA GGGCTTCTCC GCGGGCGCCG AGCTGGGCGG CGTCTCGGTC TATCTCGCCG AGCTGGCGAC GCCGGGCCGC AAGGGCTTCT TCACGAGCTG GCAATCGGCG AGCCAGCAGG TGGCGATCGT CATCGCGGCG GCCCTCGGCT TCGCGCTCAA TCAGTGGCTG AGCGCCTCGC AGATCGCCGC GTGGGGATGG CGCGTGCCGT TCTTCGTCGG CTGCATGATC GTGCCGTTCA TCTTCATGCT GCGCCGCAAC CTGGAGGAAA CGCAGGAGTT CAAGGCGCGC AAGCATCGTC CGGGCATGAA GGAGGTGTTC GGCACGCTGG TCCAGAACTG GGGCGTCGTG GTCGCCGGCA TGATGCTGGT CGCGATGACC ACCACGAGCT TCTACCTGAT CACCGTCTAT GCGCCGACCT TCGGCAAGAC CGTGCTGCAT CTGAGCACCG CCGACAGCCT GCTCGTGACG CTGTGCGTCG GCGTGTCGAA CTTCGTGTGG CTGCCGATCG GCGGGGCGCT GTCCGACCGG ATCGGCCGCC GGCCGCTGCT GGTCGGCATG ACGATGCTCA CCGTCGTGAC CGCCTACCCG GCGCTGTCGT TCCTCGCGCA CGCGCCGTCG TTCGTCAACA TGCTGCTCGT ACTGCTCTGG CTGTCGTTCA TGTACGGCAT GTACAACGGC GCGATGGTCG TCGCGCTCAC CGAAGTGATG CCGGTGCAGG TGCGCGTCGC GGGCTTCTCG CTCGCGTACA GCCTCGCGAC CGCTGTGTTC GGCGGCTTCA CGCCGGCCAT CTCGACCGGG CTCATTCACC TGACGCACGA CAAGGCCGCG CCGGGCTACT GGATGAGCTT CGCCGCGGTG TGCGCGCTGC TGGCGACGTT CGCGCTCTAT CGGCGCCGCG CCGCAACGTT GACGCCGGCG CATTGA
|
Protein sequence | MHPSSSLPAE RSKAAAIFRV TAGNFLEQFD FFLFGFYATQ IANVFFPAQS EFASLMMTFA VFGAGFLMRP LGAIVLGAYI DEVGRRKGLI VTLSIMASGT ILIAFVPGYA TIGLLAPVLV LIGRLLQGFS AGAELGGVSV YLAELATPGR KGFFTSWQSA SQQVAIVIAA ALGFALNQWL SASQIAAWGW RVPFFVGCMI VPFIFMLRRN LEETQEFKAR KHRPGMKEVF GTLVQNWGVV VAGMMLVAMT TTSFYLITVY APTFGKTVLH LSTADSLLVT LCVGVSNFVW LPIGGALSDR IGRRPLLVGM TMLTVVTAYP ALSFLAHAPS FVNMLLVLLW LSFMYGMYNG AMVVALTEVM PVQVRVAGFS LAYSLATAVF GGFTPAISTG LIHLTHDKAA PGYWMSFAAV CALLATFALY RRRAATLTPA H
|
| |