| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6117 |
|---|
| Symbol | |
|---|
| ID | 6125092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 109738 |
|---|
| End bp | 110289 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641647136 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001773733 |
|---|
| Protein GI | 170734619 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTACA GTTCACCGAT CAGTGGCTCC CCCACGAGAT GCGATGTCGA CGACGAACGC
ACGCGCTCGC GCGCGGCATG GCTGACGAGT GAATTCCGCG CGAGCTATGC ATGGCTGAAG
TCGAAACTGC AAAGGCGCGT CGGCTCGCCG GCCGATGCGG AGGATCTCGC GTCGTCGTCG
TTCGCGGAAC TTGCCGGTAT GCAGGACCTG ACAGCGGTGC GCGATGCACG GGCCTTTCTC
ACGGTCATCG CCCAGCGCCT CACCTACGAG ATGTGGCGCC GCCGCGACCT GGAACGCGCG
TACCTGGAAA CGCTCGCCCA TCGGGAAGAA GCCGTCACGC CGTCGGCGGA AAGCATGGCG
GAAGTGACGC AGGCGCTCTT GCTCGTGGAT CAGGCGTTGA ACGGCCTGTC ACCCAATGCG
AAAAGCGCCT TCATCATGAG TCAGATCGAC GGCCTCACGC ACGCTGAAAT CGCCGAGCGG
CTCGGCGTGT CGGTGAGCAT GGTCCGGAAA TATATCGCGC AGGCGCTGAC GCAGTGCTAT
CTGATGGCAT GA
|
|---|
| Protein sequence | MNYSSPISGS PTRCDVDDER TRSRAAWLTS EFRASYAWLK SKLQRRVGSP ADAEDLASSS
FAELAGMQDL TAVRDARAFL TVIAQRLTYE MWRRRDLERA YLETLAHREE AVTPSAESMA
EVTQALLLVD QALNGLSPNA KSAFIMSQID GLTHAEIAER LGVSVSMVRK YIAQALTQCY
LMA
|
|---|
| |