Gene Bcenmc03_6046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6046 
Symbol 
ID6125021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp30178 
End bp32484 
Gene Length2307 bp 
Protein Length768 aa 
Translation table11 
GC content72% 
IMG OID641647065 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001773662 
Protein GI170734548 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.479069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.26296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA TTGCACGGCC GCAGGCCGGA AATTACGCAA CGGCCGTGAT GCTGGTCGCG 
ATCGCGACCG TGTTGCAGAC GCTCGCGATC CGGTTCGGCG GCGTGAATCT GCCGTTCGTG
CTGTATTACC CGCTGCTGGC CGGCGCCGCG TGGGCGACGT CGTTCGTGTT CGGCATCGTG
TCGACGGTGG TCAGCGGGCT GCTCGTCTGG ACGCTGTTCC TGTCCGATCC GGCCGCCTAC
ACGGCGCCGC TGCCCGACCG GCTCGTGCAG CTCGGCACGT TCATCCTGAT CGGCGCGCTG
GTGTGCGCGA TCGCGTCGCT GCTGCATCAC ACGCGGCTCA CGAACGATCG CGCGCGCCGA
CGCGAGGCGG CCACGCGCCG GCAGTTCGAG GCCGTGCTGC GCGCCCTGCC GCACGGCGTG
ATCGCGACCG ACCCGAACGG GCGGCTCACC TATCTGAACG CGGCCGCGGC CGAACTCGTC
GGCTGCCGGC CGGACGAGGC GGTGGGGCGG CCGGTGCGCG ACGTGCTGCG GATCGTCGAT
CACGAAGGCC GCCGCGTGCC GACCACGCCG CTCGACCATG CGCTCGGCGG CGCCGAAGCG
ACATCCGACC GGCACTGGCT GCAGGCCGGC AGCGGCGAGC CGGTGCCGAT CGTCGCGGTC
GCGTCGCCGA TCGGCGATGC GGACGGCAAC CTGGACGGCG CGGTGCTGCT GCTGCGCGAT
GCCGGCGCGG ACCGCGCGCG CGTCGATGCG TCGCGGCTCC AGCATGCGGT CGTCGAGGCG
TCGCCGGACG CGATCGTCGG GATCGACGCC AGCGGCCGCA TCGCCAGCTG GAACGCGGCT
GCGCAGCGGA TCTTCGGCTA CGACGAGGCC GACGCGCGCG GCCGCAGGTT CGACACGCTG
ATCGCGCGGC GCTGGCTGCG GCTCAATCCG CTCGCCGACG CGTTCGACGC GATGCAGGAA
CCGGTCGGGC CGCTCGAACT GCTGTGCGTG CGGCGCGACG GCCGGCGCTT TCGGGCGACG
GTGTCGGCGT GCCCGGTGCA GGGCGACGCG CGGGCGTACG TCGCGCTATC GCTGACGCTG
CGCGAAACCG GCGCGCAGCG TCGCCGCGAC CTGCGGGCGC AGCGCTCGCT GCAGGGGGCG
CGCGATGCGC GCGATCAGGC CGATACGTCG AACCGGCTGA AGGACGAGCT GCTAGCCACG
GTGTCGCATG AATTGCGCAC GCCGCTGAAC GTGATCTACG GGTGGATCGA GGTGCTGCGC
AATACGGGCG ACCACGCGTT GCAGCATCAG GCGGTCGACG CGATCGACCG CAGCGCGCGT
TCGCTCACGC GGATGGTCGG CGACATCCTC GATGCGTCGT CGCTCGCGAC CGGCAAGCTG
CGGCTCGATG CGACGCCGGT CGACGTCGTG CGGTTGTTCT CCGACCAGGT CGGCACGTTC
CAGACCGCCG CATCGTCGGC CGGCATCCTG CTCGAATTCG ACTGCGACGC GTCCGCGTGC
ATCGTGTCGG GCGACGCCGA GCGGTTGCGG CAGATGCTGT CGAACCTCAT TTCTAACGCG
CTGAAATTCA CGCCGGGCGG CGGCAGCGTG ACGGTCGGCC TCGCGCGCGA CGGCGGGCAC
GCGGTGTTGA CCGTCGCCGA TACGGGGCAG GGCATCGCGA CGGAGTTCAC GCCGTACGTG
TTCGACATGT TCCGCCGCGC GGACGATTCG CCCGCGTCGC CGCGGCGCGG GCTCGGTCTC
GGCCTGTCGA TCGTGCGACA TATCGCGCAG CTGCACGGCG GCAGCGTGAC CGTCGCGAGT
GCGGGCCGCG ATCGCGGCAC GACGTTCACG GTGACGCTGC CGGCCGGCTG GCAGCCGGGC
GGCGCGATGG CGTGGAGCAT CGTGCAGGCG GGCGGCCAGC GCGAGGCGCT CGTGCTCGAT
ACGCAGCGCA TCCTGATCGT CGACGACGAC GCGACCACGC GGGCCAGTCT CACCGCCGCG
CTGACCACGT TCGGCGCGGC GGTCGCGATC GCGTCGTCGG GCCGCGAGGC GCTCGCGATG
GTGGCCGACA TGCGGCCGAC GGTCGTGCTG TCCGACCTCG CGATGCCCGA CGGCGACGGC
TTCTGGCTGC TGGAGGCCTT GCGGCGCGCC ACGACGAACG GCGACAGCGG CCCGCTCGAC
GTGCGCGTGC TGGCCGTCAC CGCGCACGCG GGCCTCGCCG ACGAACGCCG CGCGCTGGAG
GCCGGCTTCG ACGGCTACCT GTGCAAGCCG GTCGACGTGC GCGAACTGGC GCACAAGATC
GCGCACGTGA CGAAGCGCGA CGGCTGA
 
Protein sequence
MTEIARPQAG NYATAVMLVA IATVLQTLAI RFGGVNLPFV LYYPLLAGAA WATSFVFGIV 
STVVSGLLVW TLFLSDPAAY TAPLPDRLVQ LGTFILIGAL VCAIASLLHH TRLTNDRARR
REAATRRQFE AVLRALPHGV IATDPNGRLT YLNAAAAELV GCRPDEAVGR PVRDVLRIVD
HEGRRVPTTP LDHALGGAEA TSDRHWLQAG SGEPVPIVAV ASPIGDADGN LDGAVLLLRD
AGADRARVDA SRLQHAVVEA SPDAIVGIDA SGRIASWNAA AQRIFGYDEA DARGRRFDTL
IARRWLRLNP LADAFDAMQE PVGPLELLCV RRDGRRFRAT VSACPVQGDA RAYVALSLTL
RETGAQRRRD LRAQRSLQGA RDARDQADTS NRLKDELLAT VSHELRTPLN VIYGWIEVLR
NTGDHALQHQ AVDAIDRSAR SLTRMVGDIL DASSLATGKL RLDATPVDVV RLFSDQVGTF
QTAASSAGIL LEFDCDASAC IVSGDAERLR QMLSNLISNA LKFTPGGGSV TVGLARDGGH
AVLTVADTGQ GIATEFTPYV FDMFRRADDS PASPRRGLGL GLSIVRHIAQ LHGGSVTVAS
AGRDRGTTFT VTLPAGWQPG GAMAWSIVQA GGQREALVLD TQRILIVDDD ATTRASLTAA
LTTFGAAVAI ASSGREALAM VADMRPTVVL SDLAMPDGDG FWLLEALRRA TTNGDSGPLD
VRVLAVTAHA GLADERRALE AGFDGYLCKP VDVRELAHKI AHVTKRDG