Gene Bcenmc03_6027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6027 
Symbol 
ID6125002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp8826 
End bp10031 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID641647046 
Productalcohol dehydrogenase 
Protein accessionYP_001773643 
Protein GI170734529 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.16852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG TCGTATTTCA CGGCATCGGC GATATTCGCA TCGACACGGT GCCCGATCCG 
GAAGTCTCCG CGACGACCGA CGCGGTCGTG CGTCTCACCG CCAGCGCGAT CTGCGGCACC
GATCTGCACA TGGTGCGCGG CACGCTCGGC GGCATGAAGC CGGGCACGAT TCTCGGTCAC
GAAGGTGTCG GCATCGTCGA GGCGGTCGGG CGCGACGTGC GTAATCTGCG GCGCGGCGAT
CGCGTGCTGA TTCCGTCGAC GATCGCATGC GGCAGTTGCG CCTACTGCCG CGCGGGCTAC
ACCGCGCAAT GCGACGTCGC GAATCCGGGC GGGCCGCGCG CGGGCACGTC GTTCTTCGGT
GGGCCGGCCG AAACGGGCCC GGTCGACGGG CTGCAGGCCG AATACGCGCG CACGCCGCTT
GCGCATGCGA GCCTGATCCG GCTGCCCGAT GCGATCGACG ACGATCGCGC GATCCTGATG
TCGGACATTT TCCCGACCGG CTATTTCGGT GCGCAGCTCG CGGAAGTGAA GCCGGGCGAT
ACGGTCGCCG TGTTCGGCGC GGGGCCGGTC GGGCAGTTCG CGATCGCGAG CGCGAAGCTG
ATGGGCGCCG GGCGCGTGAT CGCGATCGAC CGCATCGCGT CGCGGCTCGA GATGGCCTGC
GCGCAGGGCG CCGAGATCGT CGATTTTTCC GAGGACGATC CGGTCGATAC GGTGCTGCGG
CTCACCGGCG GGATCGGCGT CGATCGCGTG ATCGACGCGG TGGGCGTCGA CGCGATGCGC
GCGACGCACG GGCCGGCTGC GGCCGATCGC GACGCCGCGC GCGCATTCGA TGCCGAAGTC
GACGCGATCG TGCCGCACCG CAAGCCGGAC GGCCGCAACT GGGTGCCGGG CGACGGGCCG
TCGCAGGTGC TGCAATGGGC GGTGCGCGCG GTCGCGAAGG CCGGCACGAT CTCGGTGATC
GGCGTGTATC CGCCGGCCGC GCGCGTGTTT CCGATCGGCG AGGCGATGAA CCGCAACCTG
ACGATCAAGA TGGGCAACTG CAATCACCGG ACGGTGACGC CGCCGCTCGT CGAACTGGTG
CGCAGCGGCG CATTCGACCC GCTGTCGGTG CTCACGCGCA CCGAGCCGCT GACCCACGCG
ATCGATGCGT ATCGCGCGTT CGACGTGCGC GAGCCGGGCT GGATGAAGGT GAAGCTCGCG
CCATGA
 
Protein sequence
MKAVVFHGIG DIRIDTVPDP EVSATTDAVV RLTASAICGT DLHMVRGTLG GMKPGTILGH 
EGVGIVEAVG RDVRNLRRGD RVLIPSTIAC GSCAYCRAGY TAQCDVANPG GPRAGTSFFG
GPAETGPVDG LQAEYARTPL AHASLIRLPD AIDDDRAILM SDIFPTGYFG AQLAEVKPGD
TVAVFGAGPV GQFAIASAKL MGAGRVIAID RIASRLEMAC AQGAEIVDFS EDDPVDTVLR
LTGGIGVDRV IDAVGVDAMR ATHGPAAADR DAARAFDAEV DAIVPHRKPD GRNWVPGDGP
SQVLQWAVRA VAKAGTISVI GVYPPAARVF PIGEAMNRNL TIKMGNCNHR TVTPPLVELV
RSGAFDPLSV LTRTEPLTHA IDAYRAFDVR EPGWMKVKLA P