Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5975 |
Symbol | |
ID | 6128779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 3170616 |
End bp | 3171242 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641653059 |
Product | hypothetical protein |
Protein accession | YP_001779586 |
Protein GI | 170738326 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.566181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAG CAAACCGGAC GAAGCAAAGC AGGCGTCGAC CGGTGGCCTT GGCTGGGGCC GCCGCCGCCG GCGTCCTGAC GCTTGCCCTC TCGCACGCGC AGACGCCGCC CGCTTCGTCC GCGCAGGTCG CGCCGGGCGT CATCCGTCCG GGCCCGACCG CCGACGAGGC CGGCATGACG CAGCGGCCGA CCGGCATCGA CGCCGAGTTC GTCGACAAGG CGGGCATGCT CGGCAAGGTG GAGCGACAGG CAAGCCAGCT CGCGCTCGAC CGCTCGTCGA ACGCGGAAGT CAAGGCCTTC GCACGCCGGA TGGTCGACGA TCACGCGCGT ATCGCGGACG AATTGCGGCG CATCGGGGCG CAAAAAGGCG TGCCGGTACA GACGCGGATG CTCGTCGATC CGGCGGTGAC GGCATTGCGA GCGAAGGAGG GGCGTGCGTT CGATTCGGCG TATGTGGCGC TGGCCGGGCC CCGCGCGCAC GAAGCGGCGA TCCGCCTCTA CGAAACGGAG GCAAAGGACG GCCGGGACCC ACAGCTGCGC GCGTTCGCGG CTCGCACGCT GCCGGTGTTG AACGCACACC TGAACGTCGC GCGGCAACTC GCGAAGACGG TGGCCGCCGC GCGGTGA
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Protein sequence | MTKANRTKQS RRRPVALAGA AAAGVLTLAL SHAQTPPASS AQVAPGVIRP GPTADEAGMT QRPTGIDAEF VDKAGMLGKV ERQASQLALD RSSNAEVKAF ARRMVDDHAR IADELRRIGA QKGVPVQTRM LVDPAVTALR AKEGRAFDSA YVALAGPRAH EAAIRLYETE AKDGRDPQLR AFAARTLPVL NAHLNVARQL AKTVAAAR
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