Gene Bcenmc03_5975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5975 
Symbol 
ID6128779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3170616 
End bp3171242 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID641653059 
Producthypothetical protein 
Protein accessionYP_001779586 
Protein GI170738326 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.566181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG CAAACCGGAC GAAGCAAAGC AGGCGTCGAC CGGTGGCCTT GGCTGGGGCC 
GCCGCCGCCG GCGTCCTGAC GCTTGCCCTC TCGCACGCGC AGACGCCGCC CGCTTCGTCC
GCGCAGGTCG CGCCGGGCGT CATCCGTCCG GGCCCGACCG CCGACGAGGC CGGCATGACG
CAGCGGCCGA CCGGCATCGA CGCCGAGTTC GTCGACAAGG CGGGCATGCT CGGCAAGGTG
GAGCGACAGG CAAGCCAGCT CGCGCTCGAC CGCTCGTCGA ACGCGGAAGT CAAGGCCTTC
GCACGCCGGA TGGTCGACGA TCACGCGCGT ATCGCGGACG AATTGCGGCG CATCGGGGCG
CAAAAAGGCG TGCCGGTACA GACGCGGATG CTCGTCGATC CGGCGGTGAC GGCATTGCGA
GCGAAGGAGG GGCGTGCGTT CGATTCGGCG TATGTGGCGC TGGCCGGGCC CCGCGCGCAC
GAAGCGGCGA TCCGCCTCTA CGAAACGGAG GCAAAGGACG GCCGGGACCC ACAGCTGCGC
GCGTTCGCGG CTCGCACGCT GCCGGTGTTG AACGCACACC TGAACGTCGC GCGGCAACTC
GCGAAGACGG TGGCCGCCGC GCGGTGA
 
Protein sequence
MTKANRTKQS RRRPVALAGA AAAGVLTLAL SHAQTPPASS AQVAPGVIRP GPTADEAGMT 
QRPTGIDAEF VDKAGMLGKV ERQASQLALD RSSNAEVKAF ARRMVDDHAR IADELRRIGA
QKGVPVQTRM LVDPAVTALR AKEGRAFDSA YVALAGPRAH EAAIRLYETE AKDGRDPQLR
AFAARTLPVL NAHLNVARQL AKTVAAAR