| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5941 |
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| Symbol | |
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| ID | 6128745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 3135115 |
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| End bp | 3135924 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641653025 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_001779552 |
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| Protein GI | 170738292 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.420279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0376656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC CGTTCTCAAC CGGCATTCCG CAGCTTGGGC GCGCGCTGCT GTCGTTCATG
ATCCTGGTCG CCGTCTGCGG TGTGCGTCTG CTCGTGCTGA TGACGATCTT TCCACCGACG
GGCGGCGAGT TGATCACGAA GCGCATCCGC AATGCGATGG TCGTGTTGTG GTCGATCTAC
GTCGCTTACG GACAGCAGGC GCTCATGACG CAACTGCATG GCGGATTCCT GCTGGCCGTC
GTCGTCAAGG AGGCCGTCAT CGGGCTGGTG ATCGCGTTCG TCGCGTCGCC GGTGTTCTGG
GTCGCGGAAG CCGTCGGCAC CTATATCGAC GATCTCACCG GCTACAACAA CGTGCAGATC
ACGAACCCGA GCCTCGGACA GCAGACGACG CTGACCTCCA CGCTGCTGAT GCAATGCGCG
ACCGTTGCGT TCTGGACCCT CGGCGGCATG ACGTTCCTGC TCGGCGCGGT GTTCCAGACC
TACGTGTGGT GGCCGCTCGG CAGCCTGACG CCCGTGCCGC GCGCATTCAT CGAGGCGTTC
GTGATGCAGC AGACGGATTC GCTGATGGTC ACGATCGCGA AGCTCGCCGG GCCGGCGGTG
CTGCTGTTGC TGCTCGTCGA CGTCGGGGTA GGGCTGCTGT CGCGGATCGC GTCGAAACTC
GATCTCGTCT CGCTCGCGCA GCCGGTCAAG GGCGCGCTGG CCGTGCTGTT GCTCGCGCTG
ATGATCGGCA TGTTCATCGG ACAGGTGAAG GACCAGGTTG CGTTGCTGCA TGTCGGCGAC
CAGTTGCGCG CGCTCGCGCT GCCGAGGTAA
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| Protein sequence | MIDPFSTGIP QLGRALLSFM ILVAVCGVRL LVLMTIFPPT GGELITKRIR NAMVVLWSIY
VAYGQQALMT QLHGGFLLAV VVKEAVIGLV IAFVASPVFW VAEAVGTYID DLTGYNNVQI
TNPSLGQQTT LTSTLLMQCA TVAFWTLGGM TFLLGAVFQT YVWWPLGSLT PVPRAFIEAF
VMQQTDSLMV TIAKLAGPAV LLLLLVDVGV GLLSRIASKL DLVSLAQPVK GALAVLLLAL
MIGMFIGQVK DQVALLHVGD QLRALALPR
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