Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5863 |
Symbol | |
ID | 6128667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 3042914 |
End bp | 3044890 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641652947 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001779474 |
Protein GI | 170738214 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0798132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGGA AATTCGACTA CCCGGGATTG CTGATCGCGG CGGGCTTTTT CGTGCTGTTC GCCGCGCAGT TGCTGATGCT GCACCCGACG TCGACACCGA TTGCGTACAG CGATTTTCAC CGGCTCGTCG CCGCGCGGCT CGTCGACGAT CTCGAGGTCG GCCCGACGTC GATCTCGGGC ACGCTGAAGA TGCCTCAGGC CGGCGCGATG CTGCCGGCGT CCGACGCCGC GGTCGTGCGG CAAGCCGGCA CGCCGTGGCG CTTCACGACC AGCCGCGTGA GCGACGAACA CCTGATCGAC ACGCTGACCG CCGCCGGCAT CCGCTATCAC GGCACGCCGG ATGCCGGCTG GATCACGTCG CTCGCGTCGT GGCTGCTCCC GCTCATGCTG CTGGTGTTCG TGTGGAACAT GATGCTGCGC AAGCGCGGCG GGCTGCAGGA CTTCACCGGG ATGGGCAAGA GCCGCGCACG CGTGTACGTG CAGCAGGAAA CCGGCATCAC GTTCGACGAC ATCGCGGGCA TCGACGAAGC GAAGGCCGAA CTGCAGCAGC TCGTCGCGTT CCTGCGCAAC CCCGATCGCT ACCAGCGGCT CGGCGGCAAG ATTCCGAAAG GCGTGCTCGT CGTCGGCGCG CCGGGCACGG GCAAGACGCT GCTCGCGCGT GCGGTGGCCG GCGAGGCGGC CGTGCCGTTC TTCTCGATCA GCGGCTCGGC GTTCGTCGAG ATGTTCGTCG GCGTGGGCGC CGCGCGCGTG CGCGACCTGT TCGAGCAGGC GCAGCAGAAG GCGCCATGCA TCGTGTTCGT CGACGAGCTC GATGCGCTCG GCAAGGTGCG CGGCGTCGGT CCGATGTCGG GCAACGACGA ACGCGAACAG ACGCTCAACC AGTTGCTGGT CGAGATGGAC GGCTTCCAGG CCGGCTCCGG CGTGATCATC ATGGCCGCGA CGAACCGGCC CGAGATTCTC GATCCCGCAC TGCTGCGGCC GGGCCGCTTC GATCGTCACA TCGCGATCGA CCGGCCCGAC GTGAACGGCC GCCGCCAGAT CCTCGATGTG CACGTGAAGC ACGTGAAGCT CGCGGCCGAC GTCGATCTCG GCGAGCTTGC GTCACGCACG CCGGGCTTCG TCGGCGCCGA TCTCGCGAAC GTCGTCAACG AGGCCGCGCT GCATGCGGCC GAACTCGGCA AGCCGGCGAT CGGCATGGCC GACTTCGACG AGGCGATCGA CCGCGCACTG ACGGGCCTCG AGCGCAAGAG CCGCGTGATG AACGAGCAGG AGAAGCTGAC GATCGCGTAT CACGAAGCCG GCCATGCGCT CGTCGCGGAG AGCCGCGCGC ATTGCGACCC GGTGAAGAAG GTGTCGATCA TTCCGCGCGG CGTCGCGGCA CTCGGCTACA CGCAGCAGGT GCCGACCGAG GATCGCTACG TCCTGCGCCG CAGCGAGTTG CTCGACCGGA TCGACGCGCT GCTCGGCGGG CGCGTGGCGG AAGAACTCGT GTTCGGCGAT GTGTCGACCG GCGCGCAGAA CGACCTCGAA CGCGCGACCG CGATGGCGCG CCACATGGTC ATGCAATACG GAATGAGCGA GAAGATCGGG CTTGCGACGT TCGACGACGG CGACGCACGC CAGGGCATGC CCGGCGCATG GCAGGCGGGC GACGGCCGCT GCAGCGAGCA TACCGCGCGC ATGATCGACG ACGAGGTGCG CACGCTGCTG GCCGATGCAC ATGCGCGCGT CGCGGCGACG CTCGGCGAAC GTCGCGACGC GCTCGAACGC ATCGCGCGAC GGCTGCTGCA ATGCGAGGTG CTTGAACGCG ACGTGCTGCA GGCGCTGATC GACGGGCGCA GCGAACCGCC GTCGGCGACG TCGGTGTTAC CCGGTGACGA AACGAGCGCA CGAGGCGGCG CGATCGAAAC GGAGCAGGCG TCTGCAGTCG AGCGCGATTT CATCGCGTAC CGACGGCCGC ACGAACCCGA TCATTGA
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Protein sequence | MDRKFDYPGL LIAAGFFVLF AAQLLMLHPT STPIAYSDFH RLVAARLVDD LEVGPTSISG TLKMPQAGAM LPASDAAVVR QAGTPWRFTT SRVSDEHLID TLTAAGIRYH GTPDAGWITS LASWLLPLML LVFVWNMMLR KRGGLQDFTG MGKSRARVYV QQETGITFDD IAGIDEAKAE LQQLVAFLRN PDRYQRLGGK IPKGVLVVGA PGTGKTLLAR AVAGEAAVPF FSISGSAFVE MFVGVGAARV RDLFEQAQQK APCIVFVDEL DALGKVRGVG PMSGNDEREQ TLNQLLVEMD GFQAGSGVII MAATNRPEIL DPALLRPGRF DRHIAIDRPD VNGRRQILDV HVKHVKLAAD VDLGELASRT PGFVGADLAN VVNEAALHAA ELGKPAIGMA DFDEAIDRAL TGLERKSRVM NEQEKLTIAY HEAGHALVAE SRAHCDPVKK VSIIPRGVAA LGYTQQVPTE DRYVLRRSEL LDRIDALLGG RVAEELVFGD VSTGAQNDLE RATAMARHMV MQYGMSEKIG LATFDDGDAR QGMPGAWQAG DGRCSEHTAR MIDDEVRTLL ADAHARVAAT LGERRDALER IARRLLQCEV LERDVLQALI DGRSEPPSAT SVLPGDETSA RGGAIETEQA SAVERDFIAY RRPHEPDH
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