Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5712 |
Symbol | |
ID | 6128517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2866874 |
End bp | 2867788 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641652797 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001779324 |
Protein GI | 170738064 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.043674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCG CACCGCTCAC GCTGCGCGCG TGGCTGCTTT CCGATGCGCC CGCGTCGCGC GCGCAGGCCG CGTGCGGCCT CGCCTACCGC CGCTGGCGCC GTTTCGCGGC CAATCCGCTC AACCTGTTCG GGCTCGCGAT CCTGCTGGCG CTGGTCGTCG TCGCGATCGT CGGCCCGCTG ATCATGCCGC ACGATCCGCT GCGCCAGGTG CTGTCCGACC GCCTGCTGCC GCCCGGCTCC GCGTCGCACT GGCTCGGCAC CGACCAGCTC GGCCGCGACA TCCTCTCGCG AATGATCGCC GGTTCGCGCC TGACGCTCGG CATCGCGCTG CTCGTCGTCG TGATCGTGGT GCCGATCGGC CTGCTGATCG GCACCACCGC CGGCTATTGC GGCGGCTTCG TCGACAGCGT GCTGATGCGC ATCACCGACA TCGCGCTCGC GTTCCCGAAG ATCGTGCTCG CGCTCGCGTT CGCGGCCGCG CTCGGGCCCG GCGTGATCAA CGCGGTCGTC GCGATCTCGA TCACCGCGTG GCCGGCATAC GCACGGCTCG CGCGCGCCGA AACGATCCGC ATCGCACAGG CCGACTACAT CCATGCCGCG CGGCTGCAAG GCGCGTCGGG CCCGCGCATC CTGCTGCGCT ACATCATGCC GCTGTGCATG TCGTCGGTGA TCGTGCGCGC GACGCTCGAC ATGGCCGGCA TCATCCTGAC CGTCGCGGGC CTGGGCTTTC TCGGCCTCGG CGCGCAGCCG CCGAGCCCCG AGTGGGGCTT CATGGTCGCG TCGGGCCGCA ACGTGCTGCT CGACGCGTGG TGGGTCGCGA CGCTGCCCGG CATCGCGATC CTGCTCGTGA GTCTCGCGTT CAACCTGCTC GGCGACGGGC TGCGCGACGT CTTCGATCCC CGCCATGGAG CCTGA
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Protein sequence | MNAAPLTLRA WLLSDAPASR AQAACGLAYR RWRRFAANPL NLFGLAILLA LVVVAIVGPL IMPHDPLRQV LSDRLLPPGS ASHWLGTDQL GRDILSRMIA GSRLTLGIAL LVVVIVVPIG LLIGTTAGYC GGFVDSVLMR ITDIALAFPK IVLALAFAAA LGPGVINAVV AISITAWPAY ARLARAETIR IAQADYIHAA RLQGASGPRI LLRYIMPLCM SSVIVRATLD MAGIILTVAG LGFLGLGAQP PSPEWGFMVA SGRNVLLDAW WVATLPGIAI LLVSLAFNLL GDGLRDVFDP RHGA
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