Gene Bcenmc03_5694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5694 
Symbol 
ID6128499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2848290 
End bp2849891 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content67% 
IMG OID641652779 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001779306 
Protein GI170738046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00839978 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAGTC CCTATGACGC GGACGTCATC GTCATCGGCG CGGGCATTCT GGGTGGCGCC 
GTCGCGCAGT CGCTGACGCA GCAGCGCAAG TCCGTCATCG TGATCGAGGC GGGGCCGGAG
GTGAAGCGGG CCGAGCTCGT CCGCGCGTTC CGCAACTACG GCAACAAGTC GGATTACAAC
GGCCCGTACC CGGATCTGCC GTGGGCGCCG AAGTCGTCCA CCGGCCGCTA TTCCGATCGC
TACATCGACA GCGTCGGCCC GGTGCTGCAG AAGCCGTCGT TCCTGCGGCT CGTCGGCGGC
ACGACCTGGC ACTGGGGCGG CGCGACGTGG CGCATGCTGC CGAACGATTT CCGGCTGCAC
AGCCTGTATG GGCAGGGGCG CGACTGGCCG ATCGGTTATG ACGAGCTCGA GCCGTGGTAC
CAGCTCGCGG AGGAGCAGAT CGGCGTGTCG GGCTCGGACA CCGACGACCA GAGCGGGCAA
GGCGGGGCGC CGTTCCCGCC GCGCTCGAAG CCGTACCCGA TGCCGCAGCA GCCGTGGTCG
TACCTGACGC AGCGGGTCGC GGAAAAGGTC GCGACGATCG GCCATCGTTT CGTCGACGAA
CCCAACGCGC GCGCGACGCG ACCCTACGAG GGCCGGCCGA CCTGCGCCGG CAACAACAAC
TGCGCGCCGA TCTGCCCGAT CGGCGCGCAA TTCTCCGGCG ATCGCCCGGT GCTGCGCGCC
GTCGCGCAGG GTGCGCGGCT GCTGACGAAT GCGGTCGTCT ACAAGATCGA GCGCGGCGAG
GGGCGCAAGA TCGCCGCGAT CCACTACATG ACGCCGGATG GCAAAAGCAC GCGCCTGACC
GCGCGGACCT TCGTGCTCGC GGCGCACGGT GTCGAGATTC CGAAGCTGCT GCTGATGTCG
GACGTTGCGA ACACGTCGGG CCAGGTCGGC CGCAACATGA TGGGGCACAC CGGCCGCGCG
ATCGCGATGC TCGCGCGCGA ACCGGTGTGG GCCGGGCGAG GCCCGACCCA GCAGGGCAGC
ATCAACACGC GGCGCGACGG CGCGTTTCGT CGCGAACACG GCGCGATCCG GCATTTCCTC
GACAACACCG TGCCGAACGA GATCGTCACG CGGCGGCTGA TCGCGCAAGG TGTCGTCGGC
GACGCGCTCG ATGCGCGGAT CCGCCACGAC GCGGCGCGCT ACCTGAAGAT CGCGAGCTAC
GTCGAGATCC TGCCCGACCC GCGTAACCGT GTGACGCTCA GCGATCGCAA GGATGCACTC
GGGCTGCCGA CGCCGCGTAC CGACTATGAC GTGTACGACT ATTCGTTGCG AGCGGCGTCG
CAAGTGCTCG ACGATTACCG CGACTTCCAG CAGGTGTTCG GTGCGACCGA GATCGTGAAC
GACATCCATG CGTGGGTGCC GAGTTCTCAC ATCATGGGCA CGACGATCAT GGGCAACGAT
CCGGCCGATT CGGTCGTCGA TCGCGATTGC CGAACGCACG ATCACCCGAA CCTGTTCATC
GCGAGCACGG CCGTGCACCC GAGTTCGTCG GTGGTCAATC CGACGCTGAC CGGGTATGCG
CTGGCGCTCA GGATGGCGAA GACGATTGGA GCGGAAGTCT GA
 
Protein sequence
MSSPYDADVI VIGAGILGGA VAQSLTQQRK SVIVIEAGPE VKRAELVRAF RNYGNKSDYN 
GPYPDLPWAP KSSTGRYSDR YIDSVGPVLQ KPSFLRLVGG TTWHWGGATW RMLPNDFRLH
SLYGQGRDWP IGYDELEPWY QLAEEQIGVS GSDTDDQSGQ GGAPFPPRSK PYPMPQQPWS
YLTQRVAEKV ATIGHRFVDE PNARATRPYE GRPTCAGNNN CAPICPIGAQ FSGDRPVLRA
VAQGARLLTN AVVYKIERGE GRKIAAIHYM TPDGKSTRLT ARTFVLAAHG VEIPKLLLMS
DVANTSGQVG RNMMGHTGRA IAMLAREPVW AGRGPTQQGS INTRRDGAFR REHGAIRHFL
DNTVPNEIVT RRLIAQGVVG DALDARIRHD AARYLKIASY VEILPDPRNR VTLSDRKDAL
GLPTPRTDYD VYDYSLRAAS QVLDDYRDFQ QVFGATEIVN DIHAWVPSSH IMGTTIMGND
PADSVVDRDC RTHDHPNLFI ASTAVHPSSS VVNPTLTGYA LALRMAKTIG AEV