| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5685 |
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| Symbol | |
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| ID | 6128490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2836875 |
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| End bp | 2838341 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641652770 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001779297 |
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| Protein GI | 170738037 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.166803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACC GGCTTCGGCT CTGCGCGATG CTCGCCGGCG TCGCGTTCCT GTCCGCGTGC
TCGTTCGCGC CCGCCTACCA CGCGCCGCAA ACGGCGCTGC CCGCCAGCTT CAAGGAAGCC
GGCGGCTGGC AGGCCGCGAA GCCGGCCGAC CGTATCGCGC GCGACGGCTG GTGGAAGGCG
TTCCGCGACC CCGTGCTCGA TCGGCTCGAA GCACGGGTGG CCGCCGCGAA CCCCGACGTG
GCCGCGGCCG TGGCCCGCCA CGACGAAGCG GCCGCGCTGT TCGACCAGGC ACGCTCGGGC
CTCTTCCCGA CCATCGGTCT CGGCGCGCAG ATCTCGAGCA ACCGCCAATC GGCCACGCGG
CCGCTGCGCG GCGCGAACCA GCCGAACGTC TATGGCGACA ACACGCTCGA CGCCGGCTTC
GACTACGACC TCGACCTGTG GGGGAAAGTG CGGAACGAAG TCGCGGCCGG GCGCGCCGAT
GCGCAGGCCA GCGCCGACGA TCTCGCGTCG GTGCGGCTGA GCCTGCAGGC CAGCCTCGCC
AGCGCGTACT TCAGCCTGCG CGGGCTCGAC CAGCAGCAAC AGTTGCTGGC CGACACGATC
GACACGTATC AGCGCGCGCT GCGCCTGACG ATGAGCCGGC ACGCGGGCGG CATCGCGTCC
GATCTCGACG TGTCGCGCGC GCGGACGCAG CTCGATTCCG CCCGCGCATC GGCCGAGGAC
GTACGGGCGC GGCGCGCACT CTACGAGCAC TCGATCGCGA CGCTCACGGG CGTACCGGCG
TCGTCGTTCT CGCTGACGCC GGACCTGAAC GCCGCGTATC TGCCGACGAT CCCGGCCGGC
ATTCCCGCGA CGCTGCTGCA GCGGCGTCCC GACGTCGCGG CGGCCGAGCG GCGCATGGCC
GCCGCCAACG CGAAGATCGG CGTGGTGCGC GCGGCATTCT TCCCCGACGT CACGCTCGGG
CTGGTCGGCG GCTACCAGAG CTCGGGCCTC GGCCACTGGC TCCGCGCGCC GAACGAGATC
TGGTCGATCG GGCCCAGCCT CGCGTTGACG CTGTTCGACG GCGGCCGGCG CCAGGCGCTC
ACCGACCAAG CGCGCGCGCA GCTGGCCGAG AACGGCGCGA AATACCGCGC GGTGGTGCTC
GACGCGTGCC AGCAGGTGGA AGACAACCTC GCGCTCACGC ATCACCTCGG CGACGAAGCC
GATCGCGAAC AGGAAGCGCT CGACGCGGCC GAACGCACGT TGCAGCTGTC GATGTCGCGC
TATCGGGACG GCGTCGTCAG CTATCTCGAC GTCGTGACGG CGCAGACCAC CGAGCTCGAT
ACGAAGATCG CGATGCTGGA GCTGGACACG CGCCGACAAC TGGCGGCGGT GGGCTTGATC
GCCGCGCTGG GCGGCGGGTG GTCGACCGAT GAAACTGCAT CCGGTACGCA GGCACCACCC
TCGACGCCGG TCAGTTCAGC GAACTGA
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| Protein sequence | MANRLRLCAM LAGVAFLSAC SFAPAYHAPQ TALPASFKEA GGWQAAKPAD RIARDGWWKA
FRDPVLDRLE ARVAAANPDV AAAVARHDEA AALFDQARSG LFPTIGLGAQ ISSNRQSATR
PLRGANQPNV YGDNTLDAGF DYDLDLWGKV RNEVAAGRAD AQASADDLAS VRLSLQASLA
SAYFSLRGLD QQQQLLADTI DTYQRALRLT MSRHAGGIAS DLDVSRARTQ LDSARASAED
VRARRALYEH SIATLTGVPA SSFSLTPDLN AAYLPTIPAG IPATLLQRRP DVAAAERRMA
AANAKIGVVR AAFFPDVTLG LVGGYQSSGL GHWLRAPNEI WSIGPSLALT LFDGGRRQAL
TDQARAQLAE NGAKYRAVVL DACQQVEDNL ALTHHLGDEA DREQEALDAA ERTLQLSMSR
YRDGVVSYLD VVTAQTTELD TKIAMLELDT RRQLAAVGLI AALGGGWSTD ETASGTQAPP
STPVSSAN
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