Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5521 |
Symbol | |
ID | 6128331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2664053 |
End bp | 2664763 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652611 |
Product | HAD family hydrolase |
Protein accession | YP_001779138 |
Protein GI | 170737878 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.743773 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTC GGGCCGTCAT ATTCGATTTC GACCTGACGC TGGCGGATTC GTCCGCCGCG ATCATCGAAT GCACCGAGTA CGCATTGCAT CAGCTGGGCG CCACCGGTCC GACGCCCGCG CAGATCCGCG CAGTAATCGG GCTGCCGCTG CCCGACATGT TCCGTTCGTT GGCGGGCGAA ACCGAAGCGG CACGGGCCGA GGCGTTCGCA CGGCACTTCG TGGTGCGCGC CGACGAGATC ATGGTGCCGG GCACCCGCGT CTATCCCGAA GTGCCGCCGC TGCTCGCGGC GTTGCGCGAG CAAGGGCTCG CCGTCGCGGT CGTGTCGTCG AAGTTTCGCT ACCGGATCGA CGCGATTCTC GAGCGCAACG GCTTGCAATC GCTGGTCGAC GTGTTGATCG GCGGGGAAGA CGTGCAGCGC CACAAGCCGG ACCCGGAAGG GCTCGTGCAG GCGCTGGCGC GGCTCGGTTT GCCTGCCGCG GCGGCGATCT ACGTCGGCGA CCACGCGGTG GACGCCCAGG CGGCCGAGCG TGCCGGCGTG CCGTTCGTGG GCGCGGTGAG CGGCATGACG TCGTTCGACG CGTGGGCGCA AGCCGGCAAG CAGGCGGTGC CCACGCATAT CGGCGAACTG GTCGGCATCG TGCAGCGGAT GCAGTGTCGC GCGGGCGAAA CGTGCGCCGA CGCCGAACGC GGTGCGCAAC CGGCCGGTTG A
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Protein sequence | MSVRAVIFDF DLTLADSSAA IIECTEYALH QLGATGPTPA QIRAVIGLPL PDMFRSLAGE TEAARAEAFA RHFVVRADEI MVPGTRVYPE VPPLLAALRE QGLAVAVVSS KFRYRIDAIL ERNGLQSLVD VLIGGEDVQR HKPDPEGLVQ ALARLGLPAA AAIYVGDHAV DAQAAERAGV PFVGAVSGMT SFDAWAQAGK QAVPTHIGEL VGIVQRMQCR AGETCADAER GAQPAG
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