Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5456 |
Symbol | |
ID | 6128266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2596234 |
End bp | 2597655 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652546 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001779073 |
Protein GI | 170737813 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.373718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.24303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCATT GCTGTCAGCT GAGCATGTCG GGCCCGCGGG ATGTCGAACG GCTGGTGAGC GCGCTGCCGT TCATCGCGGT CCGGCACCAT CCCGTCGCGC CGTCGCGGCC GCTCGTCTAC CTGTCGCAGC AACACGATGC TGCGCTCGTC GATGTGCTCG CGTCGCGCGG CTGGGACGTA TGGCGCGCCA AAACCGTCGC GGACGCGCTG AATCTCGTCA AGGCGAACCG TCCACATGCG GGCATCGTCG ATTTCGACAG CTTCGCGTCG CCGGACGTCG CGTCGTTCGA GGCGCTGCTG CGTGACCCGC GGGTCGGCTG GGTCGCGCTC GCCGACGGCG AACGGCTGCG CAACATCACG ATCGCGCGCC TGATCCGCCA CTGCTGCTTC GACTACGTGC GCAATGCGGC GGCCTACACG ACGATCGGCT ATCTCGTCGG CCATGCGTAC GGGATGCTGA AACTCGCGGA CGGCGACCCG GCCGCGGAGG CGCCGCCGCC CGGCGGCGCG ATGATCGGCG CGTGCGGCGC GATGCGCCGG CTGTTCGCGA CGATCCGCAA GGTCGCGAAC ACCGAGGCGA CCGTGTTCAT CGCCGGCGAA TCCGGCACCG GCAAGGAATT GACGGCGGCG GCGATCCATC GGCAATCGTC GCGTGCCGAC GCACCGTTCG TCGCCGTGAA CTGCGCGGCC ATCCCGACGA CGCTGCTGCA GGCCGAACTG TTCGGCCACG AGCGCGGTGC GTTCACGGGC GCGCACCAGC GCAAGATCGG CCGCATCGAG GCCGCGCACG GCGGCACGCT GTTTCTCGAC GAAATCGGCG ACATGCCGTT CGAGAGCCAG GCGAGCCTGC TGCGGTTCCT GCAGGAAGGC AAGATCGAGC GGCTCGGCGG GCATGCGTCG ATTCCGGTCG ACGTGCGGAT CGTGTCGGCG ACCCACGTCG ATCTCGAGGC CGCGATGCAG GCCGGGCGAT TCCGCGCCGA CCTGTATTAC CGCCTGTGCG TGCTGCGGAT CGACGAGCCG CCGCTGCGCA TGCGCGGCCG CGACATCATG CTGCTCGCCG ACGACGTGCT GCGGCGCTAT CGCGACGACG GCTCGTACCG GATTCGCGGC TTCACGCCGT GCGCGATCGA GGCGATCCAC AACTATCCGT GGCCCGGCAA CGTGCGCGAG CTGATCAACC GGATCCGCTT CGCGGTCGTG ATGACGAACG GCCCGCTGAT CTCGGCCGCC GATCTCGAAT TGCGTCCGTA CACGTCGCTG CGGCCGCCGA CGCTCGCGCA GGCGCGCCGG CAGGCCGAGC GGCACGCGAT CGAGGAAACG CTGCTGCGTC ACCGCCACCA GCATGCGGAC GTCGCGGCGG AGCTCGGCAT CTCGCGCGCG ACGCTGTACC GTCTGATGAT CGCGCACGGG CTGCACAGCT GA
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Protein sequence | MNHCCQLSMS GPRDVERLVS ALPFIAVRHH PVAPSRPLVY LSQQHDAALV DVLASRGWDV WRAKTVADAL NLVKANRPHA GIVDFDSFAS PDVASFEALL RDPRVGWVAL ADGERLRNIT IARLIRHCCF DYVRNAAAYT TIGYLVGHAY GMLKLADGDP AAEAPPPGGA MIGACGAMRR LFATIRKVAN TEATVFIAGE SGTGKELTAA AIHRQSSRAD APFVAVNCAA IPTTLLQAEL FGHERGAFTG AHQRKIGRIE AAHGGTLFLD EIGDMPFESQ ASLLRFLQEG KIERLGGHAS IPVDVRIVSA THVDLEAAMQ AGRFRADLYY RLCVLRIDEP PLRMRGRDIM LLADDVLRRY RDDGSYRIRG FTPCAIEAIH NYPWPGNVRE LINRIRFAVV MTNGPLISAA DLELRPYTSL RPPTLAQARR QAERHAIEET LLRHRHQHAD VAAELGISRA TLYRLMIAHG LHS
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