Gene Bcenmc03_5384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5384 
Symbol 
ID6128194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2508618 
End bp2509175 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content64% 
IMG OID641652474 
ProductXRE family transcriptional regulator 
Protein accessionYP_001779001 
Protein GI170737741 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.840154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.424249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC AGGAAGAGAT AGAAAGTCTG GCGATCCTAA TCCGCGACCT GCGCAAGCAT 
CGCAAGATCA CGCTGAACGA TCTCGCCGAA CGGATCGGCC GCTCGGTCGG CTTTCTGTCG
CAGGTCGAGC GCGGGCTGTC GCGCCCGACG GTCGCGGATC TCACTGCGAT CGGCGAGGCG
CTCGGCGTGC CGACCACGTA TTTCTACAGC CTGAGCAAGC CGCGCAGCGT GCGGTGGGTC
ACGCGGCCCG ACGAGCGGCG CACCGTGTAT TACGCGGCCG GCATTACCGA CATCCTCGTG
TCGCCGAACA TGCGTGCGCG CTTCTCGATC CTCGAAAGCC ATCTCGAGCC GGGCGCCAGC
AGCGGAGAGC GGCCGGTCGA CGACAGCGAC GAGCAGGGCG GCTTCGTGCT CGAAGGAGAA
CTGACGATCT GGATCGACGG CGACGACACG CCGGTCACGC TCGGTCCGAA CGATGCATTC
CAGCTTCCCG CGCACAAGCG CTTCCGTTAC GCGAACCTGA CTGATGCGCC GACGCGCGTG
ATTTGGGTAT TCACCTGA
 
Protein sequence
MNEQEEIESL AILIRDLRKH RKITLNDLAE RIGRSVGFLS QVERGLSRPT VADLTAIGEA 
LGVPTTYFYS LSKPRSVRWV TRPDERRTVY YAAGITDILV SPNMRARFSI LESHLEPGAS
SGERPVDDSD EQGGFVLEGE LTIWIDGDDT PVTLGPNDAF QLPAHKRFRY ANLTDAPTRV
IWVFT