Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5317 |
Symbol | |
ID | 6128127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 2429253 |
End bp | 2431040 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641652407 |
Product | short chain dehydrogenase |
Protein accession | YP_001778934 |
Protein GI | 170737674 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.247804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.120372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTC TTTCCGACGA AGCGCCGCTG GCCCTGTTCG AATCGGTTCA CAGCGAAACG GCGGTCGCCT CCGGCGACCT GACGCTCGCG GTCCGGACCT GGGGCGACCC GGCCCGCTCG CCGGTCGTGC TGGTACACGG TTATCCCGAC GACAGCAGCG TCTGGCAGCA CGTCGCGCCG CTGCTCGCGC GCCGGCATTA CGTGATCGCG TACGACGTAC GCGGCGCGGG CTTGTCGGGC GTACCGACGC GCACGGCCGA CTACCATCTC GCGAAGCTGA CCGACGATTT CGTCGCGGTG ATCGATGCGC TCTGCCCCGG CCGCGCCGTG CATCTGGTCG CGCACGACTG GGGCTCGATC CAGGGCTGGG AATTCGTCAC CGATCCGCGC CTGGCCGGCC GCATCGCGTC GTACACGTCG TGCTCGGGGC CGTGCCTCGA CCACGTCGGC TTCTGGCTGC GCGAACGCGT GCTGCACCCG ACGCCCGCGT CGCTGGCGAA GCTCGGCGGC CAGCTCGTGC GTTCGTGGTA CGTCTATCTG TTCCACCTGC CGTTCATCCC CGAGCTCGGC TGGCGGCTGT GGCTCGGCCG CGCGTGGCCG AGCCTGTTGC GCCGGCTCGA GAAAACGCCC GCCGCGCCAC GCCCGACCCA GGCCGACGAC GGCGCGCACG GCGTACGGCT CTATCGCGCG AACTTCATCC GCTGCCTGTT CGCGCCGCGC GAACGCTACG CGCACGCACC GGTGCAGACG ATCGTGCCGC TCGGCGACAA ATACGTGAGC CCCGCGCTGT CCGAGAACCT GTCGCGCTGG GTGCCGCAGT ACTACCGCCG CGAAGTCGCG GCCGGCCACT GGCTGCCGCT CGCCGATCCC GCGCGCTTCG CGGCGCTCGC CGAGCAATTG ATCGACGCGG TCGAATCCGG CGACGAACCG CCCGCGCTCG CGAACGCGCG CCGTCGCGCC ACCAGCGGAC GCTTCAGCGG CAAGGTCGCG GTCGTCACCG GCGCGGGCAG CGGGATCGGC CGCTGCGCGG CGCTGGCCTT CGCACGCGAA GGCGCGACGA TCGTCGCCTG CGACATCGAT CTCGCGAGCG CCGAACGCAC CGCGCTGCTG ATCGGGCTGA CCGGCGCCCA GGCCCATGCG AAACGCGTCG ACGTCGGGTC CGCCGACGAG ATGGAAGCGC TCGCGGCATG GGTCGGCAGC GAACTCGGCG GCGCGGACGT CGTGATCAAC AACGCGGGCA TCGGCATGGC CGGCGGCATC CTCGACACGA GCGCGCGGCA CTGGGAGCGC ATCCTGCACG TGAACCTGTG GGGCGTGATC CACGGCTCGC GGCTGTTCGC GCATCAGATG GCCGCGCGCG GCACCGGCGG GCACATCGTC AACACCGCGT CGGCCGCCGC GTTCGGCCCG TCGCGCGACC TGCCCGCGTA TGCGACGACG AAGGCCGCGG TGCTGATGCT CAGCGAATGC ATGCGCGCGG AACTCGCGGA GCAAGGCATC GGCGTGACGG CCGTGTGCCC CGGTTTCGCG GAAACCGGAA TCATGGCGTC GACGCACTAC GCGGGCGCCA ACGCACAGGA CGAAGCGCGG CTGCGCAAGC GCGCGACGAA GCTGTACCAG ATGCGCGGCC TGAAACCGGA AACCGTCGCG CAGGCGATGG TCGACGGCGT GCTGCGCAAC CGCCCCGTCG TCGCGGTCGG CGGCGAAGCG CACGCGCTGC GCTTCGTCGG CCGCTTCATG CCGTGGCTGG GCCGGATGAT CGCCCGCGTC AGCATGGCAT CGCATTGA
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Protein sequence | MQPLSDEAPL ALFESVHSET AVASGDLTLA VRTWGDPARS PVVLVHGYPD DSSVWQHVAP LLARRHYVIA YDVRGAGLSG VPTRTADYHL AKLTDDFVAV IDALCPGRAV HLVAHDWGSI QGWEFVTDPR LAGRIASYTS CSGPCLDHVG FWLRERVLHP TPASLAKLGG QLVRSWYVYL FHLPFIPELG WRLWLGRAWP SLLRRLEKTP AAPRPTQADD GAHGVRLYRA NFIRCLFAPR ERYAHAPVQT IVPLGDKYVS PALSENLSRW VPQYYRREVA AGHWLPLADP ARFAALAEQL IDAVESGDEP PALANARRRA TSGRFSGKVA VVTGAGSGIG RCAALAFARE GATIVACDID LASAERTALL IGLTGAQAHA KRVDVGSADE MEALAAWVGS ELGGADVVIN NAGIGMAGGI LDTSARHWER ILHVNLWGVI HGSRLFAHQM AARGTGGHIV NTASAAAFGP SRDLPAYATT KAAVLMLSEC MRAELAEQGI GVTAVCPGFA ETGIMASTHY AGANAQDEAR LRKRATKLYQ MRGLKPETVA QAMVDGVLRN RPVVAVGGEA HALRFVGRFM PWLGRMIARV SMASH
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