| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5247 |
|---|
| Symbol | |
|---|
| ID | 6128058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2346294 |
|---|
| End bp | 2347235 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641652338 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001778866 |
|---|
| Protein GI | 170737606 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.949354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAGGA GCAAGGTGTT GAACGCGATC GTCGGGCTGA CGTTCGCCGC GGGCGTCACG
GCCGGCGCGC AGGCGCAGGA AACCTATATC CCGCTGATCT CGAAAGGCTT CCAGCATCAG
TTCTGGCAGG CCGTGAAATC GGGCGCGACG CAGGCCGCGA AGGACTACAA GGTGAAGGTG
ACGTTCGAAG GGCCCGAAAC CGAGGCGATG GTCGACAAGC AGATCGACAT GCTGTCGGCC
GCGATCGCGA AGAAGCCGGC CGCGCTCGGC TTCGCGGCGC TCGACAGCAA GGCCGCACTG
CCGCTGCTGA AGAAGGCGCA GGCCGAGAAG ATCCCGGTAA TCGCGTTCGA CTCGGGCGTG
GACAGCGACA TTCCGGTGAC GACGGCCGCG ACCAACAACA AGGCGGCCGC CGCGCTCGCC
GCCGACAAGC TCGCCGCGCT GATCGGCGAC GAAGGGCAGG TGGCGGTGGT CGCGCACGAC
CAGACGAGCC GCACCGGCAT CGACCGCCGC GACGGCTTCC TCGACCGTAT GAAGTCCGCG
CACCCGAAGG TGCAGGTCGT GACCGTGCAG TACGGCGAAG GCGACCAGCT GAAATCGACC
GAAGTGACGA AGTCGATCCT GCAGGCGTAT CCGAAGCTCA AGGGGTTGTT CGGCACCAAC
GAAGGCTCGG CGATCGGCGT GGTCAACGGC GTGCGTGAGA TGAAGCGCAA GGTCGTGATC
GTCGGCTACG ATTCCGGCAA GCAGCAGAAG GACGCGATCC GCAGCGGGCT GATGGCCGGC
GCGATCACGC AGAACCCGAT CGGCATCGGC TACAAGACGG TCGAGGCGGC CGTGAAGGCG
ATCAAGGGCG AGAAGCTGCC GAAGGTCATC GATACCGGGT TCTACTGGTA CGACAAGACC
AATATCGACG ATCCGAAGAT CGCGGCGGTG TTGTACGACT GA
|
|---|
| Protein sequence | MIRSKVLNAI VGLTFAAGVT AGAQAQETYI PLISKGFQHQ FWQAVKSGAT QAAKDYKVKV
TFEGPETEAM VDKQIDMLSA AIAKKPAALG FAALDSKAAL PLLKKAQAEK IPVIAFDSGV
DSDIPVTTAA TNNKAAAALA ADKLAALIGD EGQVAVVAHD QTSRTGIDRR DGFLDRMKSA
HPKVQVVTVQ YGEGDQLKST EVTKSILQAY PKLKGLFGTN EGSAIGVVNG VREMKRKVVI
VGYDSGKQQK DAIRSGLMAG AITQNPIGIG YKTVEAAVKA IKGEKLPKVI DTGFYWYDKT
NIDDPKIAAV LYD
|
|---|
| |