| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5090 |
|---|
| Symbol | |
|---|
| ID | 6127902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2167151 |
|---|
| End bp | 2167795 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641652182 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001778710 |
|---|
| Protein GI | 170737450 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.159727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGG CGACACCACA GGTAGTGAAG CAATCGATCG CTTATGTTGT CGACGACGAC
GATTCCATGC GGTCGGCGCT CGGCATGTTG CTTCGGTCTG TTGGGCTGCG AGTCGAGCTA
TTCAGTTCGG CGCAAGAATT CCTCGCCTTC GACAAGCCGG ACGTATCCAG TTGCCTTATT
CTCGATGTGC GGCTCAAGGG GCAGAGCGGG CTCGTGTTGC AGGAGCAGAT CGTTGCCGGC
GACATGGGGT TGCCTATCAT CTTTATCACG GCGCATGGTG ACGTTGCCAT GTCGGTCAAG
GCGATGAAGA ATGGTGCGCT GGATTTTCTT TCGAAGCCGT TTCGCGATCA GGAAATGTTG
GACGCAGTGG AGGGGGCGCT ACTGAAACAC GAGGCTCGTC GCAGGACGGA TGGACGGGTT
GCGGAGGTGA GACGTCGCTA TGAATCGCTG ACCCCGCGTG AGCGGGAAGT CATGGGCTTC
GTCGTGCGGG GGTTATTGAA CAAACAGATT GCTGCGGAAA TGGATTTGAG CGAGATCACC
GTCAAGATTC ATCGCGGGAA TGCGATGCGC AAGATGGAAG TTCGCTCGCT GGCCGAGTTG
GTGCTCGGGG CAAAACTGCT GGGTATTGCT CCCGCTGACG ACTAA
|
|---|
| Protein sequence | MSEATPQVVK QSIAYVVDDD DSMRSALGML LRSVGLRVEL FSSAQEFLAF DKPDVSSCLI
LDVRLKGQSG LVLQEQIVAG DMGLPIIFIT AHGDVAMSVK AMKNGALDFL SKPFRDQEML
DAVEGALLKH EARRRTDGRV AEVRRRYESL TPREREVMGF VVRGLLNKQI AAEMDLSEIT
VKIHRGNAMR KMEVRSLAEL VLGAKLLGIA PADD
|
|---|
| |