Gene Bcenmc03_5079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5079 
Symbol 
ID6127891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2152459 
End bp2153292 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID641652171 
Productalpha/beta hydrolase fold 
Protein accessionYP_001778699 
Protein GI170737439 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACT TTAAGTCGGG TGACGATACC GAAATTTTCT ACAAGGACTG GGGCCATGGC 
ACGCCCGTTG TTTTCTCGCA CGGCTGGCCG CTGACTTCGG ATGCATGGGA TGCGCAAATG
CTGTTCTTCG GCCGTCGCGG CTACCGGGTC ATTGCGCACG ACCGTCGAGG GCATGGTCGC
TCGGCGCAGC CGTGGGACGG CAATGATATG GATACCTATG CGGACGATTT GGCTGCGCTG
CTCGATCACC TTGACGTGCG CGGTGCGATG CTGGTGGGCC ATTCCACGGG TGGCGGCGAG
GTGGCGCACT ACATCGGCCG TCACGGCACG GCACGTGTGG CGAAAGTGGT GCTGATCGGT
GCGGTACCGC CGATCATGCT GAAGACGGAA GCGAACCCGG GCGGCTTGCC GATGGAAGTG
TTCGACGGTA TTCGCGAAGG TGTTTTGAAG AACCGCTCGC AGTTTTACAG GGATCTGGCG
GTGCCGTTCC ACAACTTCAA TCGTGAGGGT GCGACGGTTT CGCAGGGGAC GATAGATTCG
TTCTGGTCGC AGGGCATGAT GGGCTCGATC AAGGGCCAGT TCGACTGTAT CCGGGAGTTC
TCGGAAGTGG ATTACACCGA GGATCTTCGA AAGATCAACG TGCCGGTACT GGTGTTGCAC
GGAGACGACG ACCAGATCGT TCCGATCGAC GCGTCGGCGC GCCGGACGGC CGCGATTGCG
CCGAATGTGA CGCTGAAGGT GTATCCGGGC GGATCGCACG GGATCGCGAT CACGCACGCC
GATCAGGTCA ATGCGGATCT GCTCGCTTTC TTCGAGAACA CGACACGCAA GTAA
 
Protein sequence
MSYFKSGDDT EIFYKDWGHG TPVVFSHGWP LTSDAWDAQM LFFGRRGYRV IAHDRRGHGR 
SAQPWDGNDM DTYADDLAAL LDHLDVRGAM LVGHSTGGGE VAHYIGRHGT ARVAKVVLIG
AVPPIMLKTE ANPGGLPMEV FDGIREGVLK NRSQFYRDLA VPFHNFNREG ATVSQGTIDS
FWSQGMMGSI KGQFDCIREF SEVDYTEDLR KINVPVLVLH GDDDQIVPID ASARRTAAIA
PNVTLKVYPG GSHGIAITHA DQVNADLLAF FENTTRK