Gene Bcenmc03_5018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5018 
Symbol 
ID6127830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2075294 
End bp2076034 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID641652110 
Producttwo component transcriptional regulator 
Protein accessionYP_001778638 
Protein GI170737378 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.259334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.450101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TCGACCACGT GCTGATCGTC GACGACGATC GCGCGATTCG CGAACTGATC 
GCGGACTACC TGGAGAAGAA CGGCATGCGC GTGTCGCTGG CCGCGAACGG CCGCGAGATG
CGCAACGCGC TGGATGACGG CGCGCCCGAC CTGATCGTCC TCGACCTGAT GCTGCCCGGC
GAGGATGGCC TGACGCTGTG CCGCGACCTG CGCGCCGGCA AGTTCCGCAC GGTGCCGGTG
CTGATGCTGA CCGCACGCGG CGAGGAAACC GATCGCATCA TCGGCCTCGA GATGGGCGCC
GACGACTACC TGGCCAAGCC GTTCGCGGTG CGCGAGCTGC TCGCGCGAAT CCGCTCGGTG
CTGCGCCGCG CGCGCATGCT GCCGCCCGGC ATGCAGGTGA CGGAAACGGC CGCGCTGCTC
GCGTTCGGCG AATGGCAGCT CGACACGACC GGGCGCCATC TGCTGGACAC CGAAGGCACG
CTGGTCGCGC TGAGCGGTGC CGAATACCGG CTGCTGCGCG TGTTCCTCGA CAACCCGCAG
CGCGTGCTGA CGCGCGACCA GTTGCTCAAC CTCACGCAAG GGCGGCAGTC CGACCCGTTC
GACCGCTCGA TCGACCTACT CGTGAGCCGG CTGCGCCAGC GCCTGCGCGA CGGCGCGCGC
GAGCCGCGCT ACATCAAGAC GCTGCGCAAC GAGGGCTACG TGTTCTCGTC GGCCGTCACC
GCCGTCGACG GTACGTCATG A
 
Protein sequence
MDKIDHVLIV DDDRAIRELI ADYLEKNGMR VSLAANGREM RNALDDGAPD LIVLDLMLPG 
EDGLTLCRDL RAGKFRTVPV LMLTARGEET DRIIGLEMGA DDYLAKPFAV RELLARIRSV
LRRARMLPPG MQVTETAALL AFGEWQLDTT GRHLLDTEGT LVALSGAEYR LLRVFLDNPQ
RVLTRDQLLN LTQGRQSDPF DRSIDLLVSR LRQRLRDGAR EPRYIKTLRN EGYVFSSAVT
AVDGTS