Gene Bcenmc03_5016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5016 
Symbol 
ID6127828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand+ 
Start bp2073797 
End bp2074435 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID641652108 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_001778636 
Protein GI170737376 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.213786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.76718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTCC CCGCCGATTT CAACGAACCC AACCCCGACG CGCTGCGCGA ACTGATCGTG 
CAGCATCCGT TCGGCAGCCT GATCACGCAC GGCAAGCGCG GGCTCGACGC GAACCACATT 
CCGTTCGAAC TGATGCCCGG CGACGGCGGG CTCGGCGAAC TGCACGCGCA CGTCGCGCGG 
GCGAATCCGG TCTGGCAGGA CGTCGCGGAC GGCGACGAGG TGCTCGTGAT CTTCCGCGCC 
GGCGACGCAT ACATCTCGCC GAACTGGTAT CCGAGCAAGC ACGTCGCGCA TCGGCAGGTG 
CCGACGTGGA ACTACCGGGT CGTGCATGCG CACGGCCGCA TCACGGTGCG CGACGACGAG 
AAGTTCGTGC GCGGCGTGGT CGCACGGCTG ACGCGCACGC ACGAGGCGTC GCAGCCGGTG 
CCGTGGAAAA TGGGCGACGC GCCGCCCGAC TACATCGCCA CGATGCTGCA AGCGATCGTC 
GGGCTGCAGA TCGAGATCAC GCGGCTCGTC GGCAAGCGCA AGCTCGGGCA GAACAAGGCC 
GAGGCCGATA TTCGCGGCGC AGGCGAAGGG CTGGTCGCGC AAGGTCATCT CGCGATCGGG 
GAAGCGATGC TGGCGGAGGC CGACGCGAAG CGCGAATGA
 
Protein sequence
MYVPADFNEP NPDALRELIV QHPFGSLITH GKRGLDANHI PFELMPGDGG LGELHAHVAR 
ANPVWQDVAD GDEVLVIFRA GDAYISPNWY PSKHVAHRQV PTWNYRVVHA HGRITVRDDE 
KFVRGVVARL TRTHEASQPV PWKMGDAPPD YIATMLQAIV GLQIEITRLV GKRKLGQNKA 
EADIRGAGEG LVAQGHLAIG EAMLAEADAK RE