| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5003 |
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| Symbol | |
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| ID | 6127815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2052863 |
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| End bp | 2055049 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641652095 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001778623 |
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| Protein GI | 170737363 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.19193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.91049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTT CCAATCTCCG GCCTCCGGCG TCGTCTCCGG CGCAGGATGT CGACTCCGGG
CTCGCGGTCG TTCTGACGAT GGCCAGCCTG CACGGCATCG CAGCCGACGA AGCCGCGTTG
CGACATGAAT TCGGCTTCTG CCGTTTCGAT ACTCAAACAA TCCTGCGAGC CGCGCGTTCA
CTTGGCATGA CGGCCCGGGC CGTTCAGCAG CACCTCGAAC GACTGGATCG AGCGCCTTTA
CCTGCGGTCG CACGGATGAA GGGCGAAGGT CGCTATTTCG TAGTCGCGCA GTATCAGGCC
GGGGATGGAA CGCGCGCGCC TCGGATGCTG GTCCAGTTTC CGGGTGAGGC GCCTACCGTG
CTGACGCGCG AGCGTCTTCT GGAAATCTGG ACGGGTGAGC TCATCTATTT CACGAGCAAG
AACAGCATTG CGGGTACCCT GGCACGCTTC GATTTCAGCT GGTTCATTCC GGCAATCGTC
ACGTACCGGA AGCTGCTGGG CGAAGTCCTC GCGATTTCTC TGGTGTTGCA GTTGATTGCG
CTCGCCACGC CGCTTTTCTT CCAGGTGGTG ATGGACAAGG TGCTGGTCAA TCACGCGATG
AAGACCTTGA ACGTGATCGC CGTTGGGTTG ATTTGCGCGA CGCTGTTCGA AGCGGCGCTT
TCGGGGATAC GCACGTGGGT CTTCGCGCAT ACGAGCAGCA AGATCGACGT CGAACTCGGC
GCGCGGCTCT TCCGGCATCT TTTGGCGTTG CCGCTGGCAT GGTTCCAGGC GCGCCGTGTC
GGCGATTCTG TCGCCCGTAT TCGCGAACTC GAGAACATTC GCGCGTTCCT CACCGGCAAC
ACAGTGACGC TGCTGATGGA CCTCGCGTTT TCGTTCGTTT TCCTCGGGGT GATGCTCTGG
TACAGCGCGT GGCTTACGTT GATCGTCTTT GTTTCGATTC CGCTCTACGT GCTGTTGTCG
GTCGTGTTTA CGCCGATCAT CCGGCGGCGC CTGAACGAAA AATTCAATAA GGGCGCCGAG
AATCAGTCGT TCCTCGTTGA AACCATCAGC GGGATCGATA CGGTCAAGGC GATGGCACTC
GAACCGCGCT GGACGGACCG ATGGGACCGT CAACTGGCCG CTTATGTGAG TGCGGGCCTG
TCGGCGACCA ACGTTGCCAC GATTGCAAGC GGTGGCGTGA CGTTGATCAG CAAGCTGGTG
ACCGCGGCGA TCATGTGGCT GGGCGCCACG CTGGTGATCG ACGGCAAGTT GACGGTCGGC
GAGCTCGTCG CGTTCAACAT GCTGGCCGGG CAGGTATCCA GTCCGATACT GCGTCTCGCG
CAGCTGTGGA ACGACTTTCA ACAGGTAGGG ATTTCGATGG GGCGCCTCGG GGATATCCTG
AATACGGCGC CCGAAACCGC AGCCAAAAAG ACGCGAGTAC CCCGTCTCGA CGGTGCGATC
GAGTTCGACC AGGTATCGTT TCGCTACCGG CCGGATGCGA GCGATGTCAT CCGGCAGATC
TCCGTCAGGA TCGCGGCGGG GGAAGTCATT GGAATCGTCG GCCGCTCCGG GTCGGGCAAA
AGCACGCTGA CCAAGCTCGT GCAGCGGCTC TACGTGCCGG ATCGCGGGCG AGTGCTGATC
GACGGGCAGG ATATCGCCGT GATCGATACG GCAAGCCTCC GCCAGCAGAT CGGTGTCGTT
CTACAGGAAA ACACGCTGTT CAATCGTTCG GTACGGGACA ACATCGCGCT GGCCCGACCC
ACTGCGTCGA TCGACGCGGT GATCGATGCA GCGCGGCTGG CCGGCGCACA CGAGTTCATC
TGCGAGCTTC CGGAGGGTTA CGACACGCTC GTCGGTGAGC ATGGCACCGG GCTTTCGGGC
GGCCAGCGGC AACGCATCGC CATTGCCCGC GCATTGATGA CCGATCCACG CGTCCTGATA
TTCGATGAGG CGACCAGCGC GCTCGACTAC GAATCCGAAG CCGTCATACA GGCCAACATG
CGTGACATCT GCGCGCGACG CACGGTATTG ATCATTGCGC ATCGGCTCTC GGCGGTGCGC
GATGCCGACC GGATTCTCGT GATGGATCGC GGGCAGATCG TGGAAAGCGG TACGCACGAC
ACGCTGCTGC GCATACGGGA AGGCATCTAC GCACACTTGT ATTCGCTGCA ACAGGGTGGT
CGTGACGTAG CGGAGGCACG GATATGA
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| Protein sequence | MNSSNLRPPA SSPAQDVDSG LAVVLTMASL HGIAADEAAL RHEFGFCRFD TQTILRAARS
LGMTARAVQQ HLERLDRAPL PAVARMKGEG RYFVVAQYQA GDGTRAPRML VQFPGEAPTV
LTRERLLEIW TGELIYFTSK NSIAGTLARF DFSWFIPAIV TYRKLLGEVL AISLVLQLIA
LATPLFFQVV MDKVLVNHAM KTLNVIAVGL ICATLFEAAL SGIRTWVFAH TSSKIDVELG
ARLFRHLLAL PLAWFQARRV GDSVARIREL ENIRAFLTGN TVTLLMDLAF SFVFLGVMLW
YSAWLTLIVF VSIPLYVLLS VVFTPIIRRR LNEKFNKGAE NQSFLVETIS GIDTVKAMAL
EPRWTDRWDR QLAAYVSAGL SATNVATIAS GGVTLISKLV TAAIMWLGAT LVIDGKLTVG
ELVAFNMLAG QVSSPILRLA QLWNDFQQVG ISMGRLGDIL NTAPETAAKK TRVPRLDGAI
EFDQVSFRYR PDASDVIRQI SVRIAAGEVI GIVGRSGSGK STLTKLVQRL YVPDRGRVLI
DGQDIAVIDT ASLRQQIGVV LQENTLFNRS VRDNIALARP TASIDAVIDA ARLAGAHEFI
CELPEGYDTL VGEHGTGLSG GQRQRIAIAR ALMTDPRVLI FDEATSALDY ESEAVIQANM
RDICARRTVL IIAHRLSAVR DADRILVMDR GQIVESGTHD TLLRIREGIY AHLYSLQQGG
RDVAEARI
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