Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5000 |
Symbol | |
ID | 6127812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2046764 |
End bp | 2047426 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641652092 |
Product | hypothetical protein |
Protein accession | YP_001778620 |
Protein GI | 170737360 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00613195 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGAAC GTCAGGGGTC GAGGTGGCGT GCCTGTTCCA AGGAACAAGA GGAGAGAGAG GGTTATGGGC CGGGGCGAGA GGAGGCGGGG AGTGACACTG AGCCCACGAA CATCTTTGGC CTAATGATCA GAATTTATCG AATGAGTCCC GCGCTCTTGG CTTTGCATCT GTCTGGTGTG GCGATTGCTT GGTTTACGCC GGATGACGCG TTGTCTCGTT GGCCATTTCT GAAGATGGCG GTAGCTAACG TTGGAGAGAT ATTCCCTTTG CTACCAGAGG CGGTGAAGAA ATCCAGGTTT CCCGACGTGA CGGCGCTGTA TTTTTTTCTG ATGTTGGTCG CGATTCCGAT GAGGCTTTCG GTAGGGATTC GCTTTTGTTA TTCGTATCGA CCTCGGATCG AGAGTGAGTA TTCGAAAATT TCTATCGCGA AGAAGATTTA CTTGATTGTT GTTGTCTTGA TGTTTATGTG TATGGGATTT CATTCGATTT TGATTGAAGG ATATTTCTAT GAGTGGAATT TTGTTGCAAT AAGCCGGTCG CGCATATGGC TGGGTTTGAT TGGACCGTTT TTTGCGGGTG GGGCTGAGGT TATCGCTATC GCGGCTGGCG TGGTTGCAAT TTTCATTGCA TTGCGCCGCG TCTTTACTTG TAAAGGGGGG TAG
|
Protein sequence | MKERQGSRWR ACSKEQEERE GYGPGREEAG SDTEPTNIFG LMIRIYRMSP ALLALHLSGV AIAWFTPDDA LSRWPFLKMA VANVGEIFPL LPEAVKKSRF PDVTALYFFL MLVAIPMRLS VGIRFCYSYR PRIESEYSKI SIAKKIYLIV VVLMFMCMGF HSILIEGYFY EWNFVAISRS RIWLGLIGPF FAGGAEVIAI AAGVVAIFIA LRRVFTCKGG
|
| |