| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4983 |
|---|
| Symbol | |
|---|
| ID | 6127795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2026062 |
|---|
| End bp | 2027387 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641652075 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001778603 |
|---|
| Protein GI | 170737343 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGACTT CCGTCAAGCA ACCGAAGCGG GCGGCGCTCG CTTCGTTCGT CGGCACCACG
ATCGAGTGGT ACGACTTCTA TAGTTATGCG ACCGCCGCCG CCATCGTGTT CGGGCCGCTG
TTCTTTCCCG GCGAAAACCG CTTCATCAGC CTGCTCGCGT CGTTCGGCTC GTTCGCGGTC
GGCTTCTTCG CGCGGCCGCT CGGCGGCGTA ATGTTCGGCT ATCTCGGCGA CCGCTTCGGC
CGCAAGCGGT CGCTGCTCGC GACGCTGATG CTGATGGCCG TGTCGACGGT CGCGATCGGC
CTGCTGCCCA CCCATGCGCA AGCCGGCGTG ATCGCACCGA TCCTGCTGGT GCTGATGCGC
GTGCTGCAAG GCATCGCGGT GGGCGGCGAA TGGGGCGGCG CGGTGCTGCT GGCCGGCGAG
CACGCGCCCG AAGGCAAGCG CACCTTCTTC GCGTCGTTCG CGCAGCTCGG CAGCGCGAGC
GGCCTGATCC TGTCGATGCT CGCGTTCGGC GCGATCAGCA CGCTGTCGAA GGACGACATG
ATGAGCTGGG GCTGGCGCGT GCCGTTCCTC GCGAGCTCGG TGCTGCTGAT CGTCGGCTTC
GTGATCCGCG CGAGCGTGTC GGAGTCGCCC GAGTTCGAGG AAGTCAGGAA GAGCGGCAAC
ATCGCGCAGA AACCGCTGCG CGACGCGCTC AAGGTCTGGC CGCTGCTGCT GCTCGCGATC
GGCGCGAACG TGTACGGTAT CGCCGGCGTG TATTTCAGCA ACATCTTCAT GATCAGTTAT
GCGACGCAGT TCCTGTCGCT CGACCGCTCG ATGGTGCTGC ATTGCATGAC GATCGTCGCG
GTGCTGCAGT TCGTCGTGCA GCTCGCGGCC GCGTTCCTCG CGCAGCGCTT CGGCACCACG
CGCGTGCTGC TGATCACCGG CGCCTGGGCG ATGATCGTCC CGTTCGTGAT GCTGCCGCTC
GTACACCTGG GCACGCCGGT GTCGATCACG GTCGGCGTCG GCCTCGCGAC GCTCGCGGAA
TCGGGCTACT ACTCGGTCGT CGCGGGCTTC GTCAGCGGCA TCTTCGTCGC GCGGATTCGC
TATACCGCAA TCTCGATCGC GTACCAGGTG TGCGGCGCGC TCGCCGGCGG CCTCACGCCG
CTGGTCGCGA CCATCATCGC GCAGAACACC GCGCCGCAAT GGTGGCCGCT TGCGCTCCAG
TACACGAGCG CCGCCGTGCT GTCGTCGCTG TGCGTGTGGT TGATCTCGCG CCGCGTCAGC
ATCGACGATG CGGGCGCACC CGGCAAGACG AACGACGCGC TGCCGCGCGG CACGCGCACC
GCATAG
|
|---|
| Protein sequence | MGTSVKQPKR AALASFVGTT IEWYDFYSYA TAAAIVFGPL FFPGENRFIS LLASFGSFAV
GFFARPLGGV MFGYLGDRFG RKRSLLATLM LMAVSTVAIG LLPTHAQAGV IAPILLVLMR
VLQGIAVGGE WGGAVLLAGE HAPEGKRTFF ASFAQLGSAS GLILSMLAFG AISTLSKDDM
MSWGWRVPFL ASSVLLIVGF VIRASVSESP EFEEVRKSGN IAQKPLRDAL KVWPLLLLAI
GANVYGIAGV YFSNIFMISY ATQFLSLDRS MVLHCMTIVA VLQFVVQLAA AFLAQRFGTT
RVLLITGAWA MIVPFVMLPL VHLGTPVSIT VGVGLATLAE SGYYSVVAGF VSGIFVARIR
YTAISIAYQV CGALAGGLTP LVATIIAQNT APQWWPLALQ YTSAAVLSSL CVWLISRRVS
IDDAGAPGKT NDALPRGTRT A
|
|---|
| |