| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4974 |
|---|
| Symbol | |
|---|
| ID | 6127786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2009445 |
|---|
| End bp | 2009999 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641652061 |
|---|
| Product | HD phosphohydrolase-like protein |
|---|
| Protein accession | YP_001778594 |
|---|
| Protein GI | 170737334 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4341] Predicted HD phosphohydrolase |
|---|
| TIGRFAM ID | [TIGR03276] phosphonate degradation operons associated HDIG domain protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000007057 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.341441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA CGGTGGAAGA GATCCACGGG CTGTATCGCG AGCATGGGCA TGTGGCCTAT
AGCGGCGAAC CGGTCACGCA GCTGGAGCAT GCATTGCAGA GCGGATTGCT GGCGGAGGAG
TCCGGGGCGG ACGAAGCGCT GGTCGCGGCG GCGTTCCTGC ATGACCTCGG CCATCTGCTG
AACCGCCAGG GCGACACGCC GAGCGCGCGC GGGATCGACG ATCTGCATCA GTATTACGTG
CTGCCGTTCC TGCGGCCGCT GTTCGACGAC GCGGTGCTGG AGCCGATCCG GCTGCATGTC
GACGCGAAGC GCTGCCTGTG CCGCACGGAC GCCGGCTACT TCGAGAGCCT GTCGCCGGAC
TCGGTGCGCA GTCTGGCGTT GCAGGGCGGC GTCTTCAGTG AAGAGGAGGC GGCGGCGTTC
CTGCGACGCC CGTTCGCGGA GGATGCGTTG CGCCTGCGCC GCTGGGACGA TACGGCGAAG
GAGGAAGGCA AGGCGACGCC GGATCTCGAT CACTATATGG AGATCGTTGC GCGCCAGGTG
CGCGCACGTT CCTGA
|
|---|
| Protein sequence | MALTVEEIHG LYREHGHVAY SGEPVTQLEH ALQSGLLAEE SGADEALVAA AFLHDLGHLL
NRQGDTPSAR GIDDLHQYYV LPFLRPLFDD AVLEPIRLHV DAKRCLCRTD AGYFESLSPD
SVRSLALQGG VFSEEEAAAF LRRPFAEDAL RLRRWDDTAK EEGKATPDLD HYMEIVARQV
RARS
|
|---|
| |