| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4960 |
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| Symbol | |
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| ID | 6127772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1993215 |
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| End bp | 1994393 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641652047 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001778580 |
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| Protein GI | 170737320 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00971777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGGCGG CGGCCCAACC ACGCCATCAA GGGGAAGTGA AAGTGAAGCT GAAGGTATCG
CACGTCGCGC TGGCCGCCGC CTGCGCACTG TCGGGCGCGC ACGCCGTCGC CGCCGACGTC
GTCAAGATCG GTTTCGCCGC ACCGCTGACC GGCCCGCAGT CGAATTACGG CACGGACATG
CAGAAGGGCG TGCAGCTCGC GATCGCCGAT TTCAACGCGA CGCATCCGAC GATCGGCGGC
AAGCCCGTCA CGTTCCAGCT CGACTCGCAG GACGACCAGG CCGACCCGCG CACCGGCACG
ACCGTCGCAC AGCGGCTGAT CGACGACAAC GTCCGCGGCG TCATCGGCCA CTTCAACTCG
GGCACCAGCA TTCCGGCGTC CGACCTGTAC GATCGCGCGG GGCTGCCGCA GATCTCGATG
GCGACGTCGC CGCAATACAC GGCGCGCGGC TACAAGACGA CCTACCGGCT GCTGACGAGC
GACGCGCAGG CCGGCCGCAT CGTCGGCACG TACGCGGTCA AGACGCTGCG CTTCAAGCGC
ATCGCGATCA TCGACGACCG CACTGCCTAC GGCCAGGGCA TCGCCGACGA ATTCGCGAAG
GCCGTGGAAG CGGCCGGCGG CACGATCGTC AAGCGCGACT TCACGAACGA CAAGGCGCTC
GATTTCTCCG CGATCCTGAC CAACCTGAAG GGCGTGAATC CGGACGCGGT CTTCTACGGC
GGTGGCGACG CGCAATCGTC GCCGATGATC CGCAAGATGC GCCAGCTCGG GATGAAGTCG
GCGTTCGTGA CGGGCGAAAT GTCGCGCTCG CCGACGTTCC TGAAGGTCGG CGGCGACGCG
GCCGAAGGCG CGATCGTCTA CATGGGCGGG CTGCCGAAGG AAAAGATGCC GGGCTTCTCC
GGCTACGCGG CACGCTACAA GGCGCGCTTC AACGAAGACG TGATCACGTA CTCGCCGTAT
TCGTACGACG GCACGATCGC GCTGCTCACC GCGATGAAGG ACGCGAACTC GACCGACCCG
AAGGTGTACA CGCCGTATCT CGGCAAGGTG TCGATCAAGG GCGTGTCGGC GCCCAGCATC
GCGTACGACC CGAAGGGCGA CCTGAAGGAC GCACCGGTCA CGATCTACAA GGTCGAGCGC
GGCGCCTTCA AGCCGGTCGA TACGATCGCC GGCAACTGA
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| Protein sequence | MPAAAQPRHQ GEVKVKLKVS HVALAAACAL SGAHAVAADV VKIGFAAPLT GPQSNYGTDM
QKGVQLAIAD FNATHPTIGG KPVTFQLDSQ DDQADPRTGT TVAQRLIDDN VRGVIGHFNS
GTSIPASDLY DRAGLPQISM ATSPQYTARG YKTTYRLLTS DAQAGRIVGT YAVKTLRFKR
IAIIDDRTAY GQGIADEFAK AVEAAGGTIV KRDFTNDKAL DFSAILTNLK GVNPDAVFYG
GGDAQSSPMI RKMRQLGMKS AFVTGEMSRS PTFLKVGGDA AEGAIVYMGG LPKEKMPGFS
GYAARYKARF NEDVITYSPY SYDGTIALLT AMKDANSTDP KVYTPYLGKV SIKGVSAPSI
AYDPKGDLKD APVTIYKVER GAFKPVDTIA GN
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