| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4926 |
|---|
| Symbol | |
|---|
| ID | 6127738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1957772 |
|---|
| End bp | 1959133 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641652013 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001778546 |
|---|
| Protein GI | 170737286 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATG AGATTCGGGT GCTGGTCGTC GAGGACGATG AAAACGTCCG GATCGGCGTC
GAGCAGGCCG TCGCGCTCGC CGGGTTCCCG GTCGACGCGT TCGCGGCGGC CGCCGACACG
CTCGCCCACG TCGCGCCCGG CGCGCCGGTG GTGATCGTGT CGGACGTGCG GATGCCGGGC
ATCGACGGGC TGCAGTTGCT CGACCGCGTG ATGGCCATCG ATGCGCAGAT CCCGGTCGTA
CTGATCAGCG GCCACGCGGA CATCTCGACG GCCGTCGGCG CGATGCAGGT CGGCGCGTAC
GACTTCATCG AGAAGCCGTT CTCGTCGGAC CTGATCGCCG GCCGCGTCGC GCGCGCGGTC
GAGAAGCGTC GCCTGACGCT CGAGGTGCAG GGGCTGCGCG CGGCGCTGAA CAACTGGCAG
GGCATCGAGG CGTTCGTGCT CGGCAAGTCG CCCGCGATGG CCGACGTGCG CAAGAAGATC
CTGCGCCTCG CCGATACGTC GGTGTCGGTG CTGATCACCG GCGAGACGGG CACCGGCAAG
GAACTGATCG CGCGCAGCCT GCACGACTTC GGCGGCCGGC GCGACGCGCA TTTCGTCGCG
CTGAACTGCG GCGGCCTGCC CGAGCAGGTG TTCGAGAGCG AGCTGTTCGG CCATGAAGCC
GGCGCGTTCA CCGGTGCGAT CAAGAAGCGC ATCGGCAAGA TCGAATGGGC GGACGGCGGC
ACGCTGTTCC TCGACGAGAT CGAGACGATG CCGATCGCGC TGCAGATCAA GATGCTGCGC
GTGCTGCAGG AGCGCGTGGT CGAGCGGCTC GGCGCGAACG ACCTGATTCC GGTCGACTGC
CGCGTGGTGG CCGCGTCGAA GGCCGATCTC GCCGAACTCG CCGCCGACGG GCGCTTTCGT
GCGGACTTGC TGTATCGCCT CAACGTCGCG CAGATCGAAT TGCCGCCGCT GCGCGAACGG
CGCGAGGACG TGCCGCTGCT GTTCGAGCAT TTCGTGCTCG CGGCCGCGCG GCGCTTCGGG
CAGCCGGCGC CGGTCGTCAC CGCCGCGCAG GTGTCCGAAC TGATGACGCA CGCGTGGCCC
GGCAACGTGC GCGAACTGCA GAACGTGGCC GACCGCTTCG TGCTCGGGCT GACCGGCGAC
AGCCTGCTGT CGTCCGGCGG CGCACCGACG GCCGGCAGCA CGCTCGCGGA ACAGCTCGCG
TATTTCGAGC GGATGCTGAT CGAGGACATG CTGCGGCGTC ACAACGGCAA CGTCGCGGAC
GCGAGCGAGG CGCTCGGCAT GCCGAAGAAA ACGCTCTATC ACAAGCTGCG CAACCTGCGG
ATTCCCGCGC GCGGCGACGC GGCGGCCGAC GGCGGCGAAT GA
|
|---|
| Protein sequence | MEDEIRVLVV EDDENVRIGV EQAVALAGFP VDAFAAAADT LAHVAPGAPV VIVSDVRMPG
IDGLQLLDRV MAIDAQIPVV LISGHADIST AVGAMQVGAY DFIEKPFSSD LIAGRVARAV
EKRRLTLEVQ GLRAALNNWQ GIEAFVLGKS PAMADVRKKI LRLADTSVSV LITGETGTGK
ELIARSLHDF GGRRDAHFVA LNCGGLPEQV FESELFGHEA GAFTGAIKKR IGKIEWADGG
TLFLDEIETM PIALQIKMLR VLQERVVERL GANDLIPVDC RVVAASKADL AELAADGRFR
ADLLYRLNVA QIELPPLRER REDVPLLFEH FVLAAARRFG QPAPVVTAAQ VSELMTHAWP
GNVRELQNVA DRFVLGLTGD SLLSSGGAPT AGSTLAEQLA YFERMLIEDM LRRHNGNVAD
ASEALGMPKK TLYHKLRNLR IPARGDAAAD GGE
|
|---|
| |