Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4918 |
Symbol | |
ID | 6127730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1947797 |
End bp | 1949014 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641652005 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001778538 |
Protein GI | 170737278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.890764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.731397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCC TACGCACCTC CCGTTCACGA ATCGCGACCG CGGCGATCGT CACGCTCGCC GTCGTCGGCC TCGGCACGTT CGGCGCGATG CGCGTCAACG CGAACGCCCC CGAGAAAGCG GCGGCGCCGC TGCCCGAAGT CGACGTCGCG ACCGTCGTGC CGCAGACCGT GACCGACTGG CAAAGCTATT CGGGCCGCCT CGAGGCGGTC GAGAAAGTCG ACGTGCGCCC GCAGGTGTCG GGCACGATCG TCGCGGTGAA TTTCAAGGAC GGCGCGCTCG TGAAGAAGGG CGACGTGCTG TTCGTGATCG ACCCGCGCCC GTACCAGGCG GAAGTCGACC GCGCGGCCGC GCAGCTCGCG GCCGCGCAGG CGCGCAACGG CTATGCGCAG ACCGACTGGC AGCGCGCGCA GCGGCTGATC GGCGACAACG CGATCGCGAA GCGCGACTAC GACGAGAAGC AGAACGCGGC GCGCGAAGCG AACGCAAACC TGAAGGCCGC CGAAGCCGCG CTGGAAACGG CCCGCATCAA CCTCGGCTAT ACGCGCATCA CCGCACCGGT ATCGGGCCGC GTGTCGCGCG CGGAAATCAC GCTCGGCAAC GTCGTGTCGG CCGGCGCATC GGCCGCGCCG CTGACGACGC TGGTGTCGGT GTCGCCGATC TACGCATCGT TCGACGCGGA CGAGCAGACC TACCTGCAAT ACATCAACGG CGCGCGCAGC GGCCGCAAGG TGCCGGTCGA GCTGGGCCTC GCGAACGAAA CCGGCTACTC GCGCAGCGGC GAGATCGATT CGGTCGACAA CCGGCTCGAC ACGTCGTCCG GCACGATCCG CGTGCGCGCA CGCTTCGACA ACGCGGACGG CACGCTCGTC CCGGGCCTGT ACGCACGGGT GAAGGTGGGC GGCAGCGCGC CGCACGAGGC GCTGCTCGTC GACGACGCGG CGATCAACAC CGACCAGGAC AAGAAGTTCG TGTTCGTCGT CGATCAGCAG GGCCGCGTGT CGTATCGCGA GGTGCAGCCG GGGATGCAGC ACGGCAACCG GCGCGTGATC GTGAGCGGCC TTGCCGCCGG CGACCGCGTG GTCGTGAACG GCACGCAGCG CGTGCGTCCC GGCGCGCAGG TGAAGCCGCA CATGGTCCCG ATGACGGGCG GCGACGAGCC GTCCGCGCCG CTCGCGAGCA CCGCGAAGCC GGCCGCACCG GCGAAGGCGG ATTCGTAA
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Protein sequence | MAILRTSRSR IATAAIVTLA VVGLGTFGAM RVNANAPEKA AAPLPEVDVA TVVPQTVTDW QSYSGRLEAV EKVDVRPQVS GTIVAVNFKD GALVKKGDVL FVIDPRPYQA EVDRAAAQLA AAQARNGYAQ TDWQRAQRLI GDNAIAKRDY DEKQNAAREA NANLKAAEAA LETARINLGY TRITAPVSGR VSRAEITLGN VVSAGASAAP LTTLVSVSPI YASFDADEQT YLQYINGARS GRKVPVELGL ANETGYSRSG EIDSVDNRLD TSSGTIRVRA RFDNADGTLV PGLYARVKVG GSAPHEALLV DDAAINTDQD KKFVFVVDQQ GRVSYREVQP GMQHGNRRVI VSGLAAGDRV VVNGTQRVRP GAQVKPHMVP MTGGDEPSAP LASTAKPAAP AKADS
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