Gene Bcenmc03_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4874 
Symbol 
ID6127686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1897348 
End bp1898289 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID641651961 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_001778494 
Protein GI170737234 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATC TGACGAGTCC CGACGTGCGC GAAGCCGACG TATTCACGCG CATGCCGGAG 
AAGTTTCGCA AGCCGGACGT CCGTACGGAA TGGGCGCGCG CGAATCGTGG CGGCATGGTC
ACCGATTCCT TTCTCGAAGG GCCGGTCTGG GACCCGGACG GCTATCTGTT CGTCACCGAC
ATTCCGCACG GGCGCATCTT CCGCATTTCG CCGTCGGGCG ACTGGGATCT CGTCGTCGAA
TACGACGGCG AGCCCAACGG GATGAAGCGC TTCGACGCAT CGCACCTGAT CATCACCGAC
TACCGGAACG GCCTGATGCT GCTCGATATC GAGCGCGGTG AAATTCGCCC GCATCTCGAG
CGCCGCAACA CCGAGCGCTT CAAGGGCGTG AACGACCTGA CGTTCGACTC GGCCGGCAAC
CTCTATTTCA CCGACCAGGG GCAGACCGGG CTGCACGATC CGACGGGCCG CGTGTATCGG
CTGTCGCCCG ACGGCAAGCT CGACATGCTG CTCGACACCT GCCCGAGCCC GAACGGGCTC
GTCCTGTCGC GCGATGAGAA GGTGCTGTTC GTCGCGATGA CGCGCGGCAA TGCCGTGTGG
CGCATGCCGC TGCAGCCCGA CGGGTCGGTC AGCAAGGTCA GCCAGTTCTT CACGTCGTAC
GGACCGAGCG GCCCCGACGG CCTCACCGTC GATCTCGAAG GCCGCCTGTT CGTCGCGAAT
CCTGGGCTCG GCCGCGTGTG GGTGCTCAAC CATTGCGCGG AGCCCGTCGA GATCCTGACC
GGACCGAAAG GGGCGTCGCT CACGAGCGTG TGCTTCGGCG GCCCCGACAT GAAGACGCTC
TTCATCACCG AATCGACGTC CGGTTCCGTC CTGAAAGCGG ACATGAGTAT TGCCGGCCCG
CTGCCGAAAC AGGCCGCGAA ACGGGCAGTG AAGCAGGACT GA
 
Protein sequence
MFYLTSPDVR EADVFTRMPE KFRKPDVRTE WARANRGGMV TDSFLEGPVW DPDGYLFVTD 
IPHGRIFRIS PSGDWDLVVE YDGEPNGMKR FDASHLIITD YRNGLMLLDI ERGEIRPHLE
RRNTERFKGV NDLTFDSAGN LYFTDQGQTG LHDPTGRVYR LSPDGKLDML LDTCPSPNGL
VLSRDEKVLF VAMTRGNAVW RMPLQPDGSV SKVSQFFTSY GPSGPDGLTV DLEGRLFVAN
PGLGRVWVLN HCAEPVEILT GPKGASLTSV CFGGPDMKTL FITESTSGSV LKADMSIAGP
LPKQAAKRAV KQD