Gene Bcenmc03_4800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4800 
Symbol 
ID6127612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1824658 
End bp1825896 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content75% 
IMG OID641651887 
Productmajor facilitator transporter 
Protein accessionYP_001778420 
Protein GI170737160 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC CGACCCGTCT CGATGCCGCG CCCCGCGCGG CGCACGCCCC GGCCCGTCCG 
GCCGCGGCCG CCCATTCGAT GCCCGATCGC CGGCTCGTGC TGCTGCTCGC GGCCGCCGCC
GGCCTCGGCG TCGCTCCGCT CTACTACGCG CAGCCGATGC TCGGCGCGCT CGCGCCCGAT
CTCGGCGCGT CGGCGCGAGC GATCGGCTTC GTGCCGACGC TCACGCAACT CGGCTATGCG
CTCGGCATCC TGCTGCTCGC GCCGCTCGGC GACCGCTTCG ACCGGCGCCG CGTGATCGTG
ACCAAGGCCG CCGCGCTGGT CGTCGCGCTG CTGCTGGCGT CGATCGCGCC GTCGCTCGGG
CTGCTGCTCG CGGCGAGCTT CGCGATCGGC CTCGCCGCGA CGATGGCGCA GGACGTCGTG
CCGGCCGCCG CCACGCTCGC GCACGACGCG CATCGCGGCC GGATCGTCGG CACGGTGATG
ACGGGGTTGC TGCTCGGCAT CCTGCTGTCG CGCGTCGTGG CCGGATTCGT CGCCGAGACG
GCCGGCTGGC GCGCGATGTT CGCGCTCGCG GCCGCCAGCG TCGCCGTGAT CGGCGCCGTG
GCCGCACGCG GGTTGCCGCG CTTCGAGCCG ACCACGCGGC TGCCGTATCG CGCGCTGATC
GGCTCGCTCG GCGCGCTGTG GCGCGCGCAT TCGGCACTGC GTCGCGCCGC GCTCGCGCAG
GGGCTGCTGG CCGTCGGGTT CAGCGCGTTC TGGTCGACGC TCGCGGTGAT GCTGCACGGC
GCGCCGTTCC ACCTCGGCAG CGCGGCCGCC GGCGCCTTCG GCCTCGCGGG CGCCGCCGGC
GCGCTGGCCG CGCCGGTCGC CGGGCGCCTG GCCGACCATC ACGGCCCGGA GCGCGTCACG
CGCATCGGGA TCGGCATCGC GACGCTGTCG TTCGCATTGA TGGCCGCCGC GCCGCTGATG
TCGCCGCATG CGCAGCTCGT GCTGCTCGCG GTCGCGACGA TCGGCTTCGA TCTCGGCGTG
CAGGCGACGC TGATCGCGCA CCAGTCGATC GTCTACCGGA TCGATCCCGC GTCGCGCAGC
CGCCTCAACG CTGTGCTGTT CGTCGGCATG TTCATCGGGA TGGCGGCCGG CGCCGCGATC
GGCAGTTTGT TGCTCGCGCA ACTGGGCTGG AATGCGGTGA CCGCGCTGGC CGTCGCGACG
TCGCTGGCCG CGCTCGCCGT GCGGGTGTGG CGCAACTGA
 
Protein sequence
MSTPTRLDAA PRAAHAPARP AAAAHSMPDR RLVLLLAAAA GLGVAPLYYA QPMLGALAPD 
LGASARAIGF VPTLTQLGYA LGILLLAPLG DRFDRRRVIV TKAAALVVAL LLASIAPSLG
LLLAASFAIG LAATMAQDVV PAAATLAHDA HRGRIVGTVM TGLLLGILLS RVVAGFVAET
AGWRAMFALA AASVAVIGAV AARGLPRFEP TTRLPYRALI GSLGALWRAH SALRRAALAQ
GLLAVGFSAF WSTLAVMLHG APFHLGSAAA GAFGLAGAAG ALAAPVAGRL ADHHGPERVT
RIGIGIATLS FALMAAAPLM SPHAQLVLLA VATIGFDLGV QATLIAHQSI VYRIDPASRS
RLNAVLFVGM FIGMAAGAAI GSLLLAQLGW NAVTALAVAT SLAALAVRVW RN