| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4754 |
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| Symbol | |
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| ID | 6127566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1772152 |
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| End bp | 1774140 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641651841 |
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| Product | Fis family proprionate catabolism activator |
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| Protein accession | YP_001778374 |
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| Protein GI | 170737114 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.574647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCT CCTCGACCAA GCCCGTCGGC CCCGCCGACC GCACCGTGCG CCCGCGCATC
TGGGCGATGG GCATCAGCCG GCTGCGCGAG CTGTTTCGCG AGATCGCCGG CGAATTCGAC
GAACGCGCCG ACGTGCGGAT CGTCACGCGC GCCTACGAAG ATGCGCTGAG CGCGATCGCC
GAGGCCGGCA CCGCGCGGCC CGACGTGATC GTCGCGGCCG GCTCGAACGG CGGCTTCCTG
AAAACGCGCG CGCAAGTACC GGTGGTGGTG GTGTCGCCGA CCGGCTTCGA CGTAATGCAG
GCGCTCGCCC GAGCGCGGCG CGATGCCACG CGGATCGCGC TCGTCAGCGC CGGGGAAACG
CCGCCCGAGG TGCGCCGCTT CGTCGCCGCG TACGGCCTCG ACGTGCAGTT TGCGTCATAT
CAGTCCGCCC AGGAAGCGGA GGCCTGCGTG CACGACCTGC GCGATCGCGG CATCGAGACG
ATCGTCGGCC CGGGCCTCGT CACCGATCTC GCGGCCAGCG TCGGCATGGG CGCGGTGTTC
CTGTATTCGC ATGCGTCGGT GCGCAAGGCC GTCGAGACGG CGCTCGAAGT CGCGTATGCG
ACGCACGCCG AGGCGTTCCG CCGCCAGCGG CTCGATACCC TGCTGCAGCA TTTGCGCGAC
GGCGTGGTCG CGCTCGACGC GCACGGCCGC GTCGAGGCGA TCAACGAGCG GCTCGCGTCG
GCGCTGGGGG TCGAACCCGC GGCGGCGGTC GGCCGCGCGC TCGTCGACCT GCGGCCCGAA
TTGCGCACGC TACGCGGCGA GGACGGCGAC GCGCTCGCGA CCGTGCGCGG CGTGCGTTAC
GTCGTGCATC GCGGGCCGCT GGTCGATCGC GGCGTCACGT CGGGCAGCGT GCTCACGTTC
CAGGAATCGC GCGCGGTCGA ACGGCTCGAT CGCGCGTTGC GTTCGCAACC GACCACGCAG
CAGTTCGCCG CCCGTTACGC GCTCGACGAC GTGGTCGGCG CCTCGGCGCC GATGACGCGC
GTGCGCGAGC TCGTGCGCCG CTACGCGAAA TCCGACGCGA CCGTACTCGT GCTCGGCGAG
AGCGGCACCG GCAAGGAAAT GATCGCGCAG AGCCTGCATG CGCTGTCCGC GCGGCGCAGC
TATCCGTTCG TCGCGGTCAA CTGCGGCGCG TTTCCGGAAG CGCTGCTGGA GAGCGAGCTG
TTCGGCTATG AGGAAGGCGC GTTCACCGGC GCACGGCGCG GCGGCAAGAC CGGCCTGTTC
GAGGCCGCGC ACCGCGGCAC GCTGTTTCTC GACGAGATCG GCGAGATGCC GCCGTCGCTG
CAAAGCCGGC TGCTGCGCGT GCTGCAGGAG CGCGAGGTGA TTCGCCTCGG CTCGACCGAG
CCGATCCGCA TCGACGTGCG CGTGATCGCC GCGACGCACC GGCCGCTGCT CGCGGCCGTC
GAGGCCGGCA CGTTCCGCGC GGATCTCTAT TACCGGCTCA ACATCCTGAA CATCGGCCTG
CCGCCGCTGC GCCAGCGCGC GGCCGACATT CCCGCGCTCG CGGCGACACT GCTCGTGCAG
GCCGCGCGGC GCGAGCCGCG GCTCGCCGAA CGCGTGCGCG ACACCGACGA CGCGCTGCGC
GTGCTCGACG CGACGCAAGC GACGCTCGCG CGCTACCGCT GGCCCGGCAA CGTGCGCGAA
CTGCAGAACG TGGTCGAGCG GATCGCGGTG GAGCTGGCGG AGGCAGTCGA CGAAAGCGAT
CCGGGCGCCG CGTGCGCGGC GCTTGCCCCC GATGCGCTGC ACGTGATCGC GCCCGAGCTG
TTCGCCGCGC CGCCCGATGC GGCCGGCGCC GCCGACGACG ATGCACGGAC GCTGCAGGCG
CGTCGCCGCC GCGCGGAAGC CGACGAGATC CGCGCGGTGC TCGACGCATG CGGCGGCGAC
CGCGACCGCG CGTGCGCGAT GCTCGGCATC AGCAAGACGA CGCTTTGGCG GAAGTTGTCG
GCGAAATAG
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| Protein sequence | MDLSSTKPVG PADRTVRPRI WAMGISRLRE LFREIAGEFD ERADVRIVTR AYEDALSAIA
EAGTARPDVI VAAGSNGGFL KTRAQVPVVV VSPTGFDVMQ ALARARRDAT RIALVSAGET
PPEVRRFVAA YGLDVQFASY QSAQEAEACV HDLRDRGIET IVGPGLVTDL AASVGMGAVF
LYSHASVRKA VETALEVAYA THAEAFRRQR LDTLLQHLRD GVVALDAHGR VEAINERLAS
ALGVEPAAAV GRALVDLRPE LRTLRGEDGD ALATVRGVRY VVHRGPLVDR GVTSGSVLTF
QESRAVERLD RALRSQPTTQ QFAARYALDD VVGASAPMTR VRELVRRYAK SDATVLVLGE
SGTGKEMIAQ SLHALSARRS YPFVAVNCGA FPEALLESEL FGYEEGAFTG ARRGGKTGLF
EAAHRGTLFL DEIGEMPPSL QSRLLRVLQE REVIRLGSTE PIRIDVRVIA ATHRPLLAAV
EAGTFRADLY YRLNILNIGL PPLRQRAADI PALAATLLVQ AARREPRLAE RVRDTDDALR
VLDATQATLA RYRWPGNVRE LQNVVERIAV ELAEAVDESD PGAACAALAP DALHVIAPEL
FAAPPDAAGA ADDDARTLQA RRRRAEADEI RAVLDACGGD RDRACAMLGI SKTTLWRKLS
AK
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