Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4743 |
Symbol | |
ID | 6127555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1761155 |
End bp | 1762642 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641651830 |
Product | putative sigma54 specific transcriptional regulator |
Protein accession | YP_001778363 |
Protein GI | 170737103 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACG ACTGGGCGCG CCTGCCCGTC AACTACGGCG ACGTGCTGCG GCGCGCCGCC GAGTCGCTGT TCCGGACCTT CGAGGATTCG AGTGCGGGCA CGGTGGTCGT CGATCGCGAC GCGCGCGTCG TGTGGATGAA CGAGCGTTAC GCGGCACGCT TCGGTTTCGC CGATCCGCAG CAGGCCGTCG GCCTCGACTG CGAGGCCGTG ATCCCGAACA GCCTGATGCG GGAAGTCGTG TCGACCGGGC AGCCGATCCT GCTCGACATC ATGGAGACGG GCCGCGAGCC GCTCGTCGTC ACGCGCCTGC CGTTGAAGAA CGAGGCCGGC GAGACGGTCG GCGCGATCGG CTTCGCGCTG TTCGACCAGT TGAAGACCCT CACGCCGATT TTTTCCCGCT ACGCGCAGCT TCAGCAGCAA CTGATCGCAA CGCAGCGCTC GCTCGCGCAG GCACGCCGCG CGAAATACAC GTTCGCGAGC TTCGTCGGCA CGAGTGCCGC GAGCCTCGAG ACCAAGCGTC AGGCGCGCCG CGCGGCGCAG GTCGATTCGC CGGTGCTGCT GCTCGGCGAG ACGGGCACCG GCAAGGAACT GCTCGCCCAC GCGATTCACG CGGCGTCGGC GCGTGCGCTG CAGCCGCTCG TGACCGTCAA CGTCGCCGCG ATTCCCGACA CGCTGCTCGA AACCGAATTC TTCGGCGCGG CGCCCGGCGC GTACACCGGC GCCGATCGCA AGGGGCGCGT CGGCAAGTTC GAGCTGGCCG ATCGCGGCAC GCTGTTTCTC GACGAGATCG GCGACATGCC GCTGCCGTTG CAGGGCAAGC TGCTGCGTGT GTTGCAGGAC AAGGAGTTCG AGCCGGTCGG TTCGAACCGG ATCGTGCGCG CGGACGTGCG CATCATCGCC GCCACGTCGG CCGACCTGCC GGCGCTGGTG GCGGCTGGGC GTTTTCGCGC GGATCTCTAT TACCGGCTGA ACGTGCTGAC GATCCATGCG CCGCCGCTGC GCGAACGCGC TTCCGACATC GCGGCGCTCG TCTACGCGAC GCTCGAGGAG CTGGCCGCGC AGCACGGGCG CGCCGCGCAC TGCGAACTGA CCGACGATGC GTTGCGGATG CTGTGCGCGT ATCCGTGGCC CGGCAACGTG CGCGAGTTGC GCAATACGCT CGAGCGCGCG CTGATGCTGT CGGATCGCTC GGTGATCGAT GCGCGCGCGC TCGCGCCGTT TCTCGGGCCG GTGCGCATTT CGCCGGACGG CGCTGCGCCG GCGCAGCGGG TTGGCGCGGT GCCGGCCGAG CAGCGCGCGG TCGATGCCCC GACGGCATCC GCTGCGCCGG CTGCCTCGTA TGCCGATGCA CTGGCGGCGT GGGAGCGCCA GTTCCTGACC GATGCGCTCG CGGCCTGTGA CGGCAAGGTC GTCGACGCGG CTGCGCGTAT CGGCATCGGC CGCGCGACGC TGTACAAGAA ACTGGCGGCG CTGGGCATCG ACCGGTAG
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Protein sequence | MMNDWARLPV NYGDVLRRAA ESLFRTFEDS SAGTVVVDRD ARVVWMNERY AARFGFADPQ QAVGLDCEAV IPNSLMREVV STGQPILLDI METGREPLVV TRLPLKNEAG ETVGAIGFAL FDQLKTLTPI FSRYAQLQQQ LIATQRSLAQ ARRAKYTFAS FVGTSAASLE TKRQARRAAQ VDSPVLLLGE TGTGKELLAH AIHAASARAL QPLVTVNVAA IPDTLLETEF FGAAPGAYTG ADRKGRVGKF ELADRGTLFL DEIGDMPLPL QGKLLRVLQD KEFEPVGSNR IVRADVRIIA ATSADLPALV AAGRFRADLY YRLNVLTIHA PPLRERASDI AALVYATLEE LAAQHGRAAH CELTDDALRM LCAYPWPGNV RELRNTLERA LMLSDRSVID ARALAPFLGP VRISPDGAAP AQRVGAVPAE QRAVDAPTAS AAPAASYADA LAAWERQFLT DALAACDGKV VDAAARIGIG RATLYKKLAA LGIDR
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