Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4712 |
Symbol | |
ID | 6127524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1727071 |
End bp | 1727691 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641651799 |
Product | hemolysin III family channel protein |
Protein accession | YP_001778332 |
Protein GI | 170737072 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.859483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATGTCG GTGAGCGTTT CAACAGCATT TCCCATCTCG TCGGCGCGGT GCTGTCGGTG GCGGGCCTTG TCGCGCTGGT GACGATGGGC GCGCTCGAAG GCGACCCGTA CAAGGTGGTG AGCTTCAGCG TGTACGGCGC GATGCTGATC CTGCTCTACG CGATCTCGAC CGCGTATCAC AGCGTGCGCA ACCCGCGCCT GAAGGCGATC CTGCAGAAAT GCGACCATGC GGCGATCTAC CTGCTGATCG CCGGCAGCTA TACGCCGTTT ACGCTCGTCA CGCTGCGCGG CCCGTGGGGC TGGTCGCTGT TCGGCGTGAG CTGGGGGCTC GCCGTGTTCG GCATCGTGCA GGAGCTCACG CTCGGGCGCC GCACGCGCCT GCTGTCGATG ATCCTCTACG TGCTGATGGG CTGGCTCGCG CTCGTCGCCG TGCGTCCGCT GATCCATGCG CTGCCGCCGA TCGGCACCGC GTGGCTCGTG GCCGGCGGCG TGATCTACAG CGCGGGGATC TACTTCTTCA TCAACGACGA ACGCATCCGC CACGGGCACG GTATCTGGCA CCTGTTCGTG CTGGCCGGCA GCCTGTGCCA GTTCGTTAGT GTCGCGATGT ATGTCGCGTA A
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Protein sequence | MHVGERFNSI SHLVGAVLSV AGLVALVTMG ALEGDPYKVV SFSVYGAMLI LLYAISTAYH SVRNPRLKAI LQKCDHAAIY LLIAGSYTPF TLVTLRGPWG WSLFGVSWGL AVFGIVQELT LGRRTRLLSM ILYVLMGWLA LVAVRPLIHA LPPIGTAWLV AGGVIYSAGI YFFINDERIR HGHGIWHLFV LAGSLCQFVS VAMYVA
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