Gene Bcenmc03_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4688 
Symbol 
ID6127504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1692696 
End bp1695206 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content62% 
IMG OID641651779 
Producthypothetical protein 
Protein accessionYP_001778312 
Protein GI170737052 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3188] P pilus assembly protein, porin PapC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000356334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000739764 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAAAAA TGAGCAAGAT CAGCGTTGCA ATTTTTCTTG CCATTGGTGC GCTGTGCCAA 
CAGGGCGCGT TCGCGCGTGG AGGGGTTGCC GGCTCGGGAG CGGACCTGTT CGAGCAGGCG
GAGCAGCTTC CGGCGGATTT TCTCGAGCAA CTGTTCGATT CGCCGCTGGT TGTGCGCATC
GATTTTGATG GCCATTCGGC AGGCGAGGGC ACGATCACGT TGAGTCGCGA TGGAAAGGTT
CAGTTGGTTG CACTCTCGGA TGAGCGGCGC AACGACATCG AACAGGGCGA TCGCGAGCTG
ATCGAAAAAT TTCTCCGTGA GCCGCGTGCG CTCGGCGCCT GCGAGACCAA CTGCGACGGT
GTGCTCGCGC TTCACTACAA CCTCCAGGAC TCCGTTTTAT CCATCGTGAC GCGCCGTGTG
GAACAGGATG GTGAGCAGAA GAAGTATCAC CCGCTGCCGG CCAGCGGAAG TACCGGCCTG
ATTGCGTACA ACTACCTGAA TCTCACGGGC GGTCAAGGCC GTGAAATCGG AGGGCGGTAT
TCGTTTGACG CCATCGGTAG CGTGGGAAAC TGGTCCATCA CGACCGGATT GCAGGCGACG
CAGAACCGCG GCATGCGGCG AGCCAGCGAG ATTGAATACT CGGTGCCCCG CCTGTACGCG
CAGCGCGAAT TCGAGGGCAA ATTCGCGCGC GCAGGTTTCT TTACGCCGGA CCTGGCAACG
GGTATCCGGC CTCCGCGCAT GCCAGGCGGA GGCGCGGCGA CCACACTTGG GGTGATGTTT
GGCACGTCCG AGGCGCGCGA GGTCGAAGGC GCGCGCCCGA GCCTCTATCC CGTCTATGTG
ACCGCCAATC GCCAGGGCAT GGTCGAAATC TACCGCAATG GCGCGTTGAT CCACAGCCAA
GCGGTGCAAC CGGGGCTGCA GGTGGTCGAT ACGCGCCCGC TACCCAGCGG CATCTATGAA
GTGGAGGTCC GGCTCGTTGA AGATGGTCAA GTTACGTCCA CGCAGCACGA GCTCGTCTAC
AAGCCCGCGG CGTGGAGCGA TCCCACACAA CGGTGGAAGT ACGCATTTTT TGCTGGACAG
GAACGCAACC TGATCGGCGA GGATCGCTCG CACGCGTTCA CCGCGGGTGG CGCGATCAAC
TACCTCGCCC ATCCTCGGGT CGTGCTCGGT GCGTCGGCTC AGCATGTGGC CGACGCCAAC
GTGTTCGGCG CGTCGCTGGA CTGGCAGTTT ACGGACCGCG CGCGAACCTA CTGGAATGTG
TACCACTCCT CGAAGCACGG AGTCGGCGGC GATGTGCAGA TCCTGATGCC GTACCGGGAC
GGGAGCGTAT CGCTGAGCCA CAGCCAGCGC TGGCAACGCA GCGACCGGCG CCATCGGAAT
GGGCGCTCGA GCGTGCGCAG CGGCAAGGTG CAGGACTCGG CGATTACGTG GAGCCATCGC
TTCACGCCGC AAACGAGCAT CATGTCGCGC GCTTCATACG CCAGCGGCGC GACGACCGGC
CTCGGTGTCG ACCTGTCAGT TTCGCATCGA CATAGTTTGT TCGGCAACGA TCTCACTTGG
CGTGTGTCCG GCTTCGATCG CCCCACCGGG ACGTTGGCGA GAACTCGCAA CCGAGGCGTC
GATCTTGGCT TGAGTATTGC GCTCGGCAAG GAAAAACGCA GTTACAACGT GAACCTCGGA
ACGCGAAGCG GCTCGGATGG CCAGCGTGAT CATTATGCGT CGCTGGGCGT ACGGCAGGAG
CTCGACGCTG GCTTCTTCAA GTCGGTGGGG GCGAATGGAA CCGTCGACCG GTATGGCTTG
AGCATGGGTG CCACCACGCA GTTCGAACAT TCGGTGGCTC GCGGCGATGC GTTCCTCCAG
CGCTCGTCCA AGGAAGGTGG CATTGCCGGC GGGATGAACC TGTCCAGTAC CGTTGGCACG
AACGGCAAGT CCGCTGCCGT ATCCGGCAAA GGCAACGCCT TCAACGGCGA GTCCGCGGTG
ATTGTGGACC TGGCATCCGA TTTCGAGGAC GTCAAGGTGC ATGCCCAGGA CACCTCGGGC
GGCAGCATTG AACTGCGCCC GGGTCGCAAT CTGGTTCCCG TGTCGGCTTA TCGCGCGGGT
CGACTCCAGT ATTTCTTCGA TCGATCGCAG GCCCCGGCGG CGACGCTGCA GCCGGCCGCG
ACCCATTACC ACCTGAACAA GGGCGGTGTC GGGTACGAGA AGGTACACGT CATGAAGACG
ATGACGGTGA TCGGTCGACT GGTCGACCAT TCAGGCAAGC CGGTGCGAGC AGCTCACCTG
TCCAGCCCCG CGGGTCGGTC GGTCACCGAG GCCGACGGAT TTTTCGCGCT CGAAGTGAGT
CATGCCAAGC CGGTTGTAAA GGTCGAGAAA GGAGGCAAGC CGCTCTGCAC GCTTCACCTG
AAGCCGCAGG ACCATCAAAT GGAAGGTGAC TCTCTGATTG TCGGGGAGTT GGAATGTGAA
CAGGAGCAGA CCAATGCCGA TTCAGGGGAA AGCCGTGATG AACAGGGGTA A
 
Protein sequence
MPKMSKISVA IFLAIGALCQ QGAFARGGVA GSGADLFEQA EQLPADFLEQ LFDSPLVVRI 
DFDGHSAGEG TITLSRDGKV QLVALSDERR NDIEQGDREL IEKFLREPRA LGACETNCDG
VLALHYNLQD SVLSIVTRRV EQDGEQKKYH PLPASGSTGL IAYNYLNLTG GQGREIGGRY
SFDAIGSVGN WSITTGLQAT QNRGMRRASE IEYSVPRLYA QREFEGKFAR AGFFTPDLAT
GIRPPRMPGG GAATTLGVMF GTSEAREVEG ARPSLYPVYV TANRQGMVEI YRNGALIHSQ
AVQPGLQVVD TRPLPSGIYE VEVRLVEDGQ VTSTQHELVY KPAAWSDPTQ RWKYAFFAGQ
ERNLIGEDRS HAFTAGGAIN YLAHPRVVLG ASAQHVADAN VFGASLDWQF TDRARTYWNV
YHSSKHGVGG DVQILMPYRD GSVSLSHSQR WQRSDRRHRN GRSSVRSGKV QDSAITWSHR
FTPQTSIMSR ASYASGATTG LGVDLSVSHR HSLFGNDLTW RVSGFDRPTG TLARTRNRGV
DLGLSIALGK EKRSYNVNLG TRSGSDGQRD HYASLGVRQE LDAGFFKSVG ANGTVDRYGL
SMGATTQFEH SVARGDAFLQ RSSKEGGIAG GMNLSSTVGT NGKSAAVSGK GNAFNGESAV
IVDLASDFED VKVHAQDTSG GSIELRPGRN LVPVSAYRAG RLQYFFDRSQ APAATLQPAA
THYHLNKGGV GYEKVHVMKT MTVIGRLVDH SGKPVRAAHL SSPAGRSVTE ADGFFALEVS
HAKPVVKVEK GGKPLCTLHL KPQDHQMEGD SLIVGELECE QEQTNADSGE SRDEQG